The 2.0 version of rSNPBase

Variant report

Variant rs10080411
Chromosome Location chr6:35343055-35343056
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35328400-35344800 Weak transcription Fetal Lung lung
2 chr6:35329000-35350800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr6:35331200-35350800 Weak transcription H9 Cell Line embryonic stem cell
4 chr6:35331600-35345400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:35331600-35345400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr6:35338200-35344400 Weak transcription Aorta Aorta
7 chr6:35338200-35344800 Weak transcription Rectal Smooth Muscle rectum
8 chr6:35338200-35356400 Weak transcription Pancreas Pancrea
9 chr6:35338400-35350800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr6:35338400-35378400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr6:35338600-35344200 Weak transcription Colon Smooth Muscle Colon
12 chr6:35338600-35345400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr6:35338600-35359400 Weak transcription Placenta Amnion Placenta Amnion
14 chr6:35338800-35344800 Weak transcription Ovary ovary
15 chr6:35338800-35350600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr6:35338800-35353400 Weak transcription Fetal Muscle Trunk muscle
17 chr6:35339000-35351000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr6:35339200-35344800 Weak transcription Stomach Smooth Muscle stomach
19 chr6:35339200-35348600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr6:35339200-35350200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr6:35339200-35350600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr6:35339200-35353400 Weak transcription Left Ventricle heart
23 chr6:35339200-35353400 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr6:35339200-35356600 Weak transcription Esophagus oesophagus
25 chr6:35339400-35343800 Weak transcription NHLF lung
26 chr6:35339400-35345400 Weak transcription Brain Angular Gyrus brain
27 chr6:35339400-35346200 Weak transcription HSMMtube muscle
28 chr6:35339400-35349400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr6:35339400-35350800 Weak transcription Right Atrium heart
30 chr6:35339400-35353600 Weak transcription Small Intestine intestine
31 chr6:35339600-35343800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:35339600-35348400 Weak transcription Muscle Satellite Cultured Cells --
33 chr6:35339600-35348600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr6:35339600-35350800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr6:35339600-35350800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr6:35339600-35350800 Weak transcription Colonic Mucosa Colon
37 chr6:35339600-35353400 Weak transcription HMEC breast
38 chr6:35339600-35353600 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr6:35339600-35357800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr6:35339800-35343400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr6:35339800-35343800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr6:35339800-35344000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:35339800-35344000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr6:35339800-35344000 Weak transcription Brain Cingulate Gyrus brain
45 chr6:35339800-35344200 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr6:35339800-35344200 Weak transcription GM12878-XiMat blood
47 chr6:35339800-35347200 Weak transcription K562 blood
48 chr6:35339800-35348600 Weak transcription NHDF-Ad bronchial
49 chr6:35339800-35349600 Weak transcription Adipose Nuclei Adipose
50 chr6:35339800-35350400 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015