Variant report

Variant	rs7773522
Chromosome Location	chr6:132740774-132740775
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1416100	0.80[EUR][1000 genomes]
rs17061243	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17190773	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2153176	0.80[EUR][1000 genomes]
rs2327243	0.82[EUR][1000 genomes]
rs36032364	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56067804	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs66578544	0.80[EUR][1000 genomes]
rs6925224	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7739846	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7761178	0.83[EUR][1000 genomes]
rs7773683	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830811	chr6:132623160-132787539	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132736800-132764600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
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