Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:132734319..132737219-chr6:132761088..132762753,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1416100	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1577995	1.00[ASN][1000 genomes]
rs17061243	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17190773	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2153176	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34871318	1.00[ASN][1000 genomes]
rs36032364	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3861470	1.00[ASN][1000 genomes]
rs55753187	1.00[ASN][1000 genomes]
rs55779505	1.00[ASN][1000 genomes]
rs56172786	1.00[ASN][1000 genomes]
rs56336490	1.00[ASN][1000 genomes]
rs66578544	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6925224	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72994859	1.00[ASN][1000 genomes]
rs72994861	1.00[ASN][1000 genomes]
rs72994866	1.00[ASN][1000 genomes]
rs72994868	1.00[ASN][1000 genomes]
rs72994871	1.00[ASN][1000 genomes]
rs72994872	1.00[ASN][1000 genomes]
rs72994875	1.00[ASN][1000 genomes]
rs7449646	1.00[ASN][1000 genomes]
rs7739846	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7755527	1.00[ASN][1000 genomes]
rs7755532	1.00[ASN][1000 genomes]
rs7773522	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7773683	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs951466	1.00[ASN][1000 genomes]
rs951467	1.00[ASN][1000 genomes]
rs951468	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830811	chr6:132623160-132787539	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132732200-132735400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:132733600-132735600	Enhancers	NHDF-Ad	bronchial
3	chr6:132734000-132735400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr6:132734000-132735800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:132734200-132735600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr6:132734200-132735800	Enhancers	Fetal Kidney	kidney
7	chr6:132734400-132736200	Enhancers	Osteobl	bone
8	chr6:132734600-132736200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr6:132734800-132736000	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr6:132735000-132735400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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