Variant report

Variant	rs7788665
Chromosome Location	chr7:96880081-96880082
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10247445	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10262772	0.89[EUR][1000 genomes]
rs10273271	0.93[EUR][1000 genomes]
rs10447802	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10953206	0.91[EUR][1000 genomes]
rs11761274	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11761292	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11763948	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11765610	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11767058	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11773045	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12113049	0.95[CEU][hapmap]
rs1358386	0.91[EUR][1000 genomes]
rs1527736	0.93[EUR][1000 genomes]
rs1554794	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17417775	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17417892	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2141229	0.91[EUR][1000 genomes]
rs2222726	0.87[EUR][1000 genomes]
rs4382405	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs55962343	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56168496	0.93[EUR][1000 genomes]
rs56211623	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6465572	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6465573	0.90[EUR][1000 genomes]
rs6465574	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6465575	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6958340	0.93[EUR][1000 genomes]
rs6960395	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6967782	0.95[CEU][hapmap];0.90[TSI][hapmap]
rs73233846	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7778412	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7785621	0.93[EUR][1000 genomes]
rs7795634	0.95[CEU][hapmap]
rs7807781	0.91[EUR][1000 genomes]
rs7807818	0.90[EUR][1000 genomes]
rs7808489	0.89[EUR][1000 genomes]
rs799609	0.96[EUR][1000 genomes]

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs7788665	FBXO24	cis	parietal	SCAN
rs7788665	ZSCAN21	cis	cerebellum	SCAN
rs7788665	ACN9	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:96879400-96881200	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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