Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:25496599..25499358-chr7:25502366..25504064,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10486458	0.83[EUR][1000 genomes]
rs11539443	1.00[ASN][1000 genomes]
rs17151656	0.91[EUR][1000 genomes]
rs17151702	1.00[ASN][1000 genomes]
rs17251882	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17317200	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17367591	1.00[ASN][1000 genomes]
rs17367682	1.00[ASN][1000 genomes]
rs17464623	1.00[ASN][1000 genomes]
rs17727166	1.00[ASN][1000 genomes]
rs2391133	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3857727	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3913611	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4722468	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs55803172	1.00[ASN][1000 genomes]
rs55938803	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56175323	1.00[ASN][1000 genomes]
rs56234882	1.00[ASN][1000 genomes]
rs56241258	1.00[ASN][1000 genomes]
rs56401538	1.00[ASN][1000 genomes]
rs6958937	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73084000	1.00[ASN][1000 genomes]
rs73085945	1.00[ASN][1000 genomes]
rs73085983	1.00[ASN][1000 genomes]
rs73085990	1.00[ASN][1000 genomes]
rs73085991	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv606426	chr7:25254125-25621579	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1016813	chr7:25405859-26150509	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
3	nsv538803	chr7:25405859-26150509	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	108 gene(s)	inside rSNPs	diseases
4	nsv1033664	chr7:25471881-25503391	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1033757	chr7:25472222-25504421	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:25496800-25498600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr7:25496800-25498600	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr7:25496800-25499200	Weak transcription	Psoas Muscle	Psoas
4	chr7:25496800-25500000	Weak transcription	Right Atrium	heart
5	chr7:25497000-25498600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr7:25497000-25500000	Weak transcription	Liver	Liver
7	chr7:25497200-25498400	Weak transcription	Gastric	stomach
8	chr7:25497200-25500000	Weak transcription	Ovary	ovary

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