Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10232106	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10237518	0.81[AMR][1000 genomes]
rs10251377	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs10251521	0.91[AMR][1000 genomes]
rs10261599	0.85[AMR][1000 genomes]
rs10281923	0.85[AMR][1000 genomes]
rs1404709	0.91[AMR][1000 genomes]
rs1404710	0.82[AMR][1000 genomes]
rs1406289	0.85[AMR][1000 genomes]
rs1525228	0.88[AMR][1000 genomes]
rs17170491	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs2140807	0.91[AMR][1000 genomes]
rs4725716	0.82[AMR][1000 genomes]
rs62481227	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6464799	0.85[AMR][1000 genomes]
rs6943018	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs6968569	0.82[AMR][1000 genomes]
rs6968578	0.82[AMR][1000 genomes]
rs7792070	0.86[AMR][1000 genomes]
rs7794718	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv608954	chr7:147104887-147145576	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
3	nsv1024540	chr7:147105149-147138125	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147130000-147135200	Weak transcription	Muscle Satellite Cultured Cells	--

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