Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:106104141..106105251-chr8:106729947..106730923,5	MCF-7	breast:
2	chr8:106436396..106438465-chr8:106729490..106731467,28	MCF-7	breast:
3	chr8:106436744..106437837-chr8:106729804..106730935,7	MCF-7	breast:
4	chr8:105799293..105801645-chr8:106728562..106731539,2	MCF-7	breast:
5	chr8:105800010..105800701-chr8:106730006..106730804,2	MCF-7	breast:
6	chr8:105799818..105801063-chr8:106729954..106731035,13	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11776679	0.81[ASN][1000 genomes]
rs12541049	0.84[ASN][1000 genomes]
rs12545480	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12545946	0.95[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs1372621	0.83[EUR][1000 genomes]
rs16873601	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2028552	0.83[EUR][1000 genomes]
rs28565020	0.82[ASN][1000 genomes]
rs3779776	0.95[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs57566398	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6992301	0.82[ASN][1000 genomes]
rs73305060	0.95[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs73305067	0.94[EUR][1000 genomes]
rs73305069	0.83[EUR][1000 genomes]
rs73305073	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs753534	0.83[EUR][1000 genomes]
rs753535	0.83[EUR][1000 genomes]
rs7816793	0.82[ASN][1000 genomes]
rs7823563	0.83[ASN][1000 genomes]
rs9643019	0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9643020	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv831418	chr8:106648456-106833333	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:106647400-106735200	Weak transcription	K562	blood
2	chr8:106721000-106735400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr8:106727600-106733000	Weak transcription	Left Ventricle	heart
4	chr8:106727800-106730600	Enhancers	HMEC	breast
5	chr8:106727800-106730800	Enhancers	NHEK	skin
6	chr8:106727800-106730800	Enhancers	NHLF	lung
7	chr8:106728800-106730600	Enhancers	Ovary	ovary
8	chr8:106729200-106736400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr8:106729200-106742600	Weak transcription	Right Ventricle	heart
10	chr8:106729400-106733200	Weak transcription	Right Atrium	heart
11	chr8:106729600-106730600	Enhancers	A549	lung
12	chr8:106729600-106731000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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