Variant report

Variant	rs7816793
Chromosome Location	chr8:106741456-106741457
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:106730527..106732072-chr8:106741402..106744068,2	K562	blood:
2	chr8:106734841..106737013-chr8:106740132..106741862,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10106386	0.93[ASW][hapmap];0.92[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1025856	0.95[AFR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10808406	0.91[CEU][hapmap];0.85[EUR][1000 genomes]
rs10808407	0.84[CEU][hapmap]
rs11776679	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12541049	0.99[ASN][1000 genomes]
rs12542643	0.92[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12545480	0.89[ASN][1000 genomes]
rs12545946	0.82[ASN][1000 genomes]
rs12546300	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12547056	0.90[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.91[ASN][1000 genomes]
rs1372621	0.83[ASN][1000 genomes]
rs1442326	0.91[ASN][1000 genomes]
rs1578995	0.81[ASW][hapmap];0.92[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16873601	0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs1992471	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2165644	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28565020	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3779776	0.81[ASN][1000 genomes]
rs4302813	0.91[ASN][1000 genomes]
rs57566398	0.97[ASN][1000 genomes]
rs58307372	0.91[ASN][1000 genomes]
rs6469013	0.80[ASN][1000 genomes]
rs6992301	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7003445	0.90[AFR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73305060	0.81[ASN][1000 genomes]
rs73305067	0.82[ASN][1000 genomes]
rs73305069	0.83[ASN][1000 genomes]
rs73305073	0.97[ASN][1000 genomes]
rs753534	0.83[ASN][1000 genomes]
rs753535	0.83[ASN][1000 genomes]
rs753536	0.97[AFR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7823089	0.82[ASN][1000 genomes]
rs7823563	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7836133	0.93[AFR][1000 genomes];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv831418	chr8:106648456-106833333	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv891260	chr8:106737459-106808078	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:106729200-106742600	Weak transcription	Right Ventricle	heart
2	chr8:106734200-106743200	Weak transcription	Aorta	Aorta
3	chr8:106735400-106742200	Weak transcription	K562	blood
4	chr8:106736000-106742600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr8:106738000-106742600	Weak transcription	Adipose Nuclei	Adipose
6	chr8:106738400-106742400	Weak transcription	Fetal Lung	lung
7	chr8:106739000-106742400	Weak transcription	Colon Smooth Muscle	Colon
8	chr8:106739200-106742600	Weak transcription	Ovary	ovary
9	chr8:106741000-106742400	Weak transcription	Psoas Muscle	Psoas
10	chr8:106741000-106743000	Enhancers	HUVEC	blood vessel
11	chr8:106741000-106744400	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr8:106741200-106744200	Enhancers	Monocytes-CD14+_RO01746	blood

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