Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10106386	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1025856	0.92[EUR][1000 genomes]
rs11776679	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12541049	0.82[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs12542643	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12545480	0.92[ASN][1000 genomes]
rs12546300	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12547056	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1442326	0.93[ASN][1000 genomes]
rs1578995	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16873601	0.93[ASN][1000 genomes]
rs2028552	0.81[ASN][1000 genomes]
rs2165644	0.92[EUR][1000 genomes]
rs28565020	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4302813	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs57566398	0.91[ASN][1000 genomes]
rs58307372	0.94[ASN][1000 genomes]
rs6469013	0.83[ASN][1000 genomes]
rs6992301	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7003445	0.82[EUR][1000 genomes]
rs73305073	0.91[ASN][1000 genomes]
rs753536	0.89[EUR][1000 genomes]
rs7816793	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7823563	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7836133	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv831418	chr8:106648456-106833333	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv891260	chr8:106737459-106808078	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:106742400-106746200	Enhancers	Fetal Heart	heart
2	chr8:106742800-106760000	Weak transcription	Left Ventricle	heart
3	chr8:106743400-106746200	Weak transcription	Fetal Brain Female	brain
4	chr8:106743400-106755600	Weak transcription	Right Ventricle	heart
5	chr8:106743600-106768400	Weak transcription	Psoas Muscle	Psoas
6	chr8:106743800-106745600	Enhancers	K562	blood
7	chr8:106743800-106745800	Weak transcription	Fetal Lung	lung
8	chr8:106743800-106746200	Weak transcription	Right Atrium	heart
9	chr8:106743800-106753200	Weak transcription	Aorta	Aorta
10	chr8:106743800-106755400	Weak transcription	Ovary	ovary
11	chr8:106743800-106756000	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr8:106744000-106746800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr8:106744200-106745800	Weak transcription	Colon Smooth Muscle	Colon
14	chr8:106744200-106746000	Weak transcription	Rectal Smooth Muscle	rectum
15	chr8:106744200-106746000	Weak transcription	Stomach Smooth Muscle	stomach
16	chr8:106744400-106755800	Weak transcription	Adipose Nuclei	Adipose
17	chr8:106744800-106751200	Weak transcription	NHLF	lung

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