Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CYP7A1-1	chr8:59183840-59184106	XLOC_007090
2	lnc-CYP7A1-1	chr8:59183840-59184106	ENSG00000253281

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11782762	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11984794	0.81[AMR][1000 genomes]
rs11990692	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11990749	1.00[CEU][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.92[TSI][hapmap];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11993378	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13439582	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs16923230	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17200731	0.80[GIH][hapmap];0.81[JPT][hapmap];0.82[MKK][hapmap]
rs28450584	0.96[ASN][1000 genomes]
rs28588801	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28620829	1.00[ASN][1000 genomes]
rs28783706	1.00[ASN][1000 genomes]
rs28848865	0.85[ASN][1000 genomes]
rs4077832	0.82[AMR][1000 genomes]
rs4078275	0.83[AMR][1000 genomes]
rs4639499	0.81[CHD][hapmap];0.81[AMR][1000 genomes]
rs56282232	0.87[AMR][1000 genomes]
rs62512271	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62512300	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62514295	0.99[ASN][1000 genomes]
rs6988662	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7003372	1.00[CEU][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.92[TSI][hapmap];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7007613	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7843843	CA8	cis	cerebellum	SCAN

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59170800-59187800	Weak transcription	Fetal Lung	lung
2	chr8:59183400-59184000	Enhancers	Fetal Stomach	stomach
3	chr8:59183600-59184000	Enhancers	Colon Smooth Muscle	Colon
4	chr8:59183600-59185400	Enhancers	Fetal Muscle Leg	muscle
5	chr8:59183600-59187200	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr8:59183800-59184400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr8:59183800-59184800	Enhancers	Brain Anterior Caudate	brain
8	chr8:59183800-59185600	Enhancers	Primary monocytes fromperipheralblood	blood

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