Variant report

Variant	rs4077832
Chromosome Location	chr8:59186336-59186337
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10098212	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10435589	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11984794	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11990667	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11993378	0.84[AFR][1000 genomes]
rs16923230	0.84[AFR][1000 genomes]
rs17198545	0.87[AMR][1000 genomes]
rs28588801	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs4639499	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56395012	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs56885504	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs62512271	0.84[AFR][1000 genomes]
rs62512300	0.84[AMR][1000 genomes]
rs6988662	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs7843843	0.82[AMR][1000 genomes]
rs9297986	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9297987	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59170800-59187800	Weak transcription	Fetal Lung	lung
2	chr8:59183600-59187200	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr8:59184000-59187400	Weak transcription	Fetal Stomach	stomach
4	chr8:59185400-59186400	Weak transcription	Fetal Muscle Leg	muscle
5	chr8:59185400-59187600	Weak transcription	HSMM	muscle
6	chr8:59185400-59193200	Weak transcription	Spleen	Spleen
7	chr8:59185400-59195800	Weak transcription	Right Atrium	heart
8	chr8:59186200-59187400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr8:59186200-59187600	Enhancers	Fetal Muscle Trunk	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links