Variant report

Variant	rs10098212
Chromosome Location	chr8:59167331-59167332
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10435589	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11984794	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11990667	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11990749	0.84[YRI][hapmap]
rs11993378	0.81[AMR][1000 genomes]
rs16923230	0.81[AMR][1000 genomes]
rs17198545	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4077832	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4639499	1.00[CEU][hapmap];0.88[YRI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs56395012	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56885504	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62512266	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62512271	0.81[AMR][1000 genomes]
rs7003372	0.84[YRI][hapmap]
rs9297986	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9297987	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9643503	0.85[JPT][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59162200-59170000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:59166400-59168800	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr8:59166600-59170400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:59166800-59168600	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr8:59167000-59167400	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr8:59167000-59168400	Weak transcription	Fetal Muscle Leg	muscle
7	chr8:59167000-59170800	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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