Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10115890	0.85[AFR][1000 genomes]
rs10117236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10119044	0.85[AFR][1000 genomes]
rs10119048	0.85[AFR][1000 genomes]
rs10120391	0.88[AFR][1000 genomes]
rs10121801	0.85[AFR][1000 genomes]
rs10217595	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10992730	0.85[AFR][1000 genomes]
rs12345304	0.85[AFR][1000 genomes]
rs12345623	0.85[AFR][1000 genomes]
rs12555047	0.94[ASN][1000 genomes]
rs2841683	0.80[ASN][1000 genomes]
rs4255201	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs55766809	0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs55846141	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55893789	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73651207	0.85[AFR][1000 genomes]
rs73651208	0.85[AFR][1000 genomes]
rs7849843	0.85[AFR][1000 genomes]
rs7867699	0.85[AFR][1000 genomes]
rs7868092	0.85[AFR][1000 genomes]

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs7863760	RP11-165J3.6	cis	Skin Sun Exposed Lower leg	GTEx
rs7863760	RP11-165J3.6	cis	Thyroid	GTEx
rs7863760	RP11-165J3.6	cis	Esophagus Muscularis	GTEx
rs7863760	HMGB3	trans	lymphoblastoid	RTeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96182000-96182600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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