Variant report

Variant	rs10120391
Chromosome Location	chr9:96181936-96181937
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:96178869..96180391-chr9:96180917..96182559,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000201074	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10115890	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10117236	0.88[AFR][1000 genomes]
rs10119044	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10119048	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10121801	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10217595	0.88[AFR][1000 genomes]
rs10992730	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12345304	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12345623	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12347917	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16909145	0.94[EUR][1000 genomes]
rs16909167	0.88[EUR][1000 genomes]
rs16909202	0.94[EUR][1000 genomes]
rs16909214	0.94[EUR][1000 genomes]
rs41274380	0.94[EUR][1000 genomes]
rs41274382	0.94[EUR][1000 genomes]
rs41274392	0.94[EUR][1000 genomes]
rs41274394	0.94[EUR][1000 genomes]
rs6479486	0.94[EUR][1000 genomes]
rs7020585	0.94[EUR][1000 genomes]
rs7027881	0.94[EUR][1000 genomes]
rs7031483	0.94[EUR][1000 genomes]
rs7035026	0.88[EUR][1000 genomes]
rs73651207	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73651208	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7849843	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7863760	0.88[AFR][1000 genomes]
rs7864950	0.88[EUR][1000 genomes]
rs7867699	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7868092	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7873803	0.94[EUR][1000 genomes]
rs7875378	1.00[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96179600-96182000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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