Variant report

Variant	rs10119044
Chromosome Location	chr9:96170628-96170629
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:96169162..96173033-chr9:96213587..96217020,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000048828	Chromatin interaction
ENSG00000188938	Chromatin interaction

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10115890	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10117236	0.85[AFR][1000 genomes]
rs10119048	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10120391	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10121801	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10217595	0.85[AFR][1000 genomes]
rs10992730	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12345304	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12345623	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12347917	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16909145	0.94[EUR][1000 genomes]
rs16909167	0.88[EUR][1000 genomes]
rs16909202	0.94[EUR][1000 genomes]
rs16909214	0.94[EUR][1000 genomes]
rs41274380	0.94[EUR][1000 genomes]
rs41274382	0.94[EUR][1000 genomes]
rs41274392	0.94[EUR][1000 genomes]
rs41274394	0.94[EUR][1000 genomes]
rs6479486	0.94[EUR][1000 genomes]
rs7020585	0.94[EUR][1000 genomes]
rs7027881	0.94[EUR][1000 genomes]
rs7031483	0.94[EUR][1000 genomes]
rs7035026	0.88[EUR][1000 genomes]
rs73651207	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73651208	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7849843	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7863760	0.85[AFR][1000 genomes]
rs7864950	0.88[EUR][1000 genomes]
rs7867699	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7868092	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7873803	0.94[EUR][1000 genomes]
rs7875378	1.00[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links