Variant report

Variant	rs7863995
Chromosome Location	chr9:102214227-102214228
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12553249	0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12553685	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1373131	0.83[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs16918616	0.84[ASN][1000 genomes]
rs17795913	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2416771	0.80[EUR][1000 genomes]
rs2900171	0.84[ASN][1000 genomes]
rs57550843	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57713933	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs617164	0.85[ASN][1000 genomes]
rs623874	0.85[ASN][1000 genomes]
rs634202	0.85[ASN][1000 genomes]
rs638261	0.85[ASN][1000 genomes]
rs649057	0.85[ASN][1000 genomes]
rs666399	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831667	chr9:102068047-102285691	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv6636	chr9:102197504-102242604	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102212600-102214800	Enhancers	Fetal Heart	heart
2	chr9:102213200-102214600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr9:102213400-102214400	Enhancers	Fetal Brain Female	brain
4	chr9:102213400-102214400	Enhancers	Placenta Amnion	Placenta Amnion

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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