Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10508716	1.00[EUR][1000 genomes]
rs11015010	1.00[EUR][1000 genomes]
rs12253114	1.00[EUR][1000 genomes]
rs16926523	1.00[EUR][1000 genomes]
rs16926634	1.00[EUR][1000 genomes]
rs16926866	1.00[EUR][1000 genomes]
rs57059254	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61322866	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7068224	1.00[EUR][1000 genomes]
rs74126456	1.00[EUR][1000 genomes]
rs74126457	1.00[EUR][1000 genomes]
rs74126459	1.00[EUR][1000 genomes]
rs74126460	1.00[EUR][1000 genomes]
rs74126461	1.00[EUR][1000 genomes]
rs74126462	1.00[EUR][1000 genomes]
rs74126465	1.00[EUR][1000 genomes]
rs74126466	1.00[EUR][1000 genomes]
rs7476345	1.00[EUR][1000 genomes]
rs7922748	1.00[EUR][1000 genomes]
rs8190585	1.00[EUR][1000 genomes]
rs8190593	1.00[EUR][1000 genomes]
rs8190689	1.00[EUR][1000 genomes]
rs8190714	1.00[EUR][1000 genomes]
rs8190720	1.00[EUR][1000 genomes]
rs8190807	1.00[EUR][1000 genomes]
rs8190815	1.00[EUR][1000 genomes]
rs928198	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894975	chr10:26343356-27014467	Strong transcription Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26440800-26473400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr10:26451200-26456600	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr10:26451600-26456800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr10:26452000-26456800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr10:26452000-26456800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr10:26452200-26456600	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr10:26453800-26457400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr10:26453800-26458400	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr10:26453800-26466800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr10:26454200-26457600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr10:26454600-26458400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr10:26455200-26456200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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