Variant report

Variant	rs7899301
Chromosome Location	chr10:119010224-119010225
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs17095936	0.92[EUR][1000 genomes]
rs17095973	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2532802	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2619098	0.92[EUR][1000 genomes]
rs2619099	0.92[EUR][1000 genomes]
rs2619101	0.92[EUR][1000 genomes]
rs28634565	0.92[EUR][1000 genomes]
rs363318	0.92[EUR][1000 genomes]
rs363319	0.92[EUR][1000 genomes]
rs363320	0.92[EUR][1000 genomes]
rs363321	0.92[EUR][1000 genomes]
rs363322	0.92[EUR][1000 genomes]
rs363364	0.92[EUR][1000 genomes]
rs363405	1.00[EUR][1000 genomes]
rs3753127	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57663418	0.92[EUR][1000 genomes]
rs58968504	0.92[EUR][1000 genomes]
rs61560104	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119001600-119013400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:119001800-119011800	Weak transcription	Ovary	ovary
3	chr10:119008800-119010400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr10:119009000-119010800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr10:119009000-119011400	Enhancers	Primary T cells from cord blood	blood
6	chr10:119009000-119012400	Enhancers	Thymus	Thymus
7	chr10:119009000-119012600	Enhancers	Fetal Thymus	thymus
8	chr10:119009200-119017600	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr10:119009600-119011200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr10:119009600-119018600	Weak transcription	Primary hematopoietic stem cells	blood
11	chr10:119009800-119011000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr10:119009800-119018400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
13	chr10:119010000-119017400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr10:119010200-119011000	Enhancers	H1 Cell Line	embryonic stem cell
15	chr10:119010200-119011400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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