Variant report

Variant	rs7901137
Chromosome Location	chr10:23303458-23303459
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1054052	0.82[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs10764371	0.82[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs10764374	0.93[AMR][1000 genomes]
rs10828394	0.81[AMR][1000 genomes]
rs10828396	0.81[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs10828397	0.81[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs10828400	0.92[AMR][1000 genomes]
rs11013228	0.84[AMR][1000 genomes]
rs11013240	0.81[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs11013242	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11013244	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11814322	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12780334	0.90[AMR][1000 genomes]
rs17441682	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2219797	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4748833	0.83[AMR][1000 genomes]
rs58091240	0.89[AMR][1000 genomes]
rs6482247	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6482249	0.91[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv975810	chr10:23302287-23306366	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23300000-23303800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr10:23301400-23311200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:23303200-23304000	Enhancers	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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