Variant report

Variant	rs11013228
Chromosome Location	chr10:23286466-23286467
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:23286320..23291300-chr10:23340827..23345371,11	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1054052	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs1060761	0.96[CEU][hapmap];0.86[CHB][hapmap];0.93[GIH][hapmap];0.91[JPT][hapmap];0.92[MEX][hapmap];0.98[TSI][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764371	0.86[CHB][hapmap];0.82[CHD][hapmap];0.90[JPT][hapmap]
rs10764374	0.82[AMR][1000 genomes]
rs10828394	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10828400	0.81[AMR][1000 genomes]
rs11013242	0.85[AMR][1000 genomes]
rs11013244	0.88[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.85[AMR][1000 genomes]
rs1170929	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11814322	0.88[CEU][hapmap];0.86[CHB][hapmap];0.90[JPT][hapmap];0.85[AMR][1000 genomes]
rs11814683	0.84[CEU][hapmap];0.86[CHB][hapmap];0.90[JPT][hapmap];0.94[YRI][hapmap]
rs11817610	0.87[ASW][hapmap];0.92[CEU][hapmap];0.91[CHB][hapmap];0.82[CHD][hapmap];0.91[JPT][hapmap];0.91[MEX][hapmap];0.85[MKK][hapmap];0.81[TSI][hapmap]
rs11819616	0.92[CEU][hapmap];0.91[CHB][hapmap];0.90[JPT][hapmap]
rs12780334	0.81[CEU][hapmap];0.92[MEX][hapmap]
rs1382577	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17441682	0.85[AMR][1000 genomes]
rs2219797	0.80[AMR][1000 genomes]
rs2927925	0.86[JPT][hapmap]
rs3101795	0.96[CEU][hapmap];0.86[JPT][hapmap];0.88[MEX][hapmap];0.93[TSI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4748833	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6482247	0.85[AMR][1000 genomes]
rs6482249	0.80[AMR][1000 genomes]
rs7901137	0.84[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23282800-23294200	Weak transcription	Pancreas	Pancrea
2	chr10:23286200-23287200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr10:23286400-23290000	Weak transcription	Brain Hippocampus Middle	brain

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