Variant report

Variant	rs4748833
Chromosome Location	chr10:23293614-23293615
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:23291803..23294504-chr10:23315242..23318022,2	K562	blood:
2	chr10:23281631..23284076-chr10:23292100..23294027,2	K562	blood:
3	chr10:23293163..23294906-chr10:23341702..23344445,2	K562	blood:
4	chr10:23292060..23293987-chr10:23331739..23334191,2	MCF-7	breast:
5	chr10:23293138..23295321-chr10:23343056..23344878,2	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1054052	0.87[CHB][hapmap];0.86[JPT][hapmap];0.95[YRI][hapmap]
rs1060761	0.89[CEU][hapmap];0.86[CHB][hapmap];0.86[JPT][hapmap];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10764370	0.80[CHB][hapmap]
rs10764371	0.86[CHB][hapmap];0.86[JPT][hapmap];0.95[YRI][hapmap]
rs10764374	0.81[AMR][1000 genomes]
rs10828394	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10828400	0.80[AMR][1000 genomes]
rs11013228	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11013242	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs11013244	0.96[CEU][hapmap];0.87[CHB][hapmap];0.91[JPT][hapmap];0.95[YRI][hapmap];0.82[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs1170929	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11814322	0.96[CEU][hapmap];0.87[CHB][hapmap];0.87[JPT][hapmap];0.95[YRI][hapmap];0.82[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs11814683	0.85[CEU][hapmap];0.86[CHB][hapmap];0.86[JPT][hapmap]
rs11817610	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.95[YRI][hapmap]
rs11819616	1.00[CEU][hapmap];0.92[CHB][hapmap];0.95[JPT][hapmap];0.95[YRI][hapmap]
rs12780334	0.88[CEU][hapmap]
rs1382577	0.93[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17441682	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs2927925	0.83[JPT][hapmap]
rs3101795	0.89[CEU][hapmap];0.81[JPT][hapmap];0.84[AMR][1000 genomes]
rs6482247	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes]
rs7901137	0.83[AMR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23282800-23294200	Weak transcription	Pancreas	Pancrea
2	chr10:23291200-23295000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links