Variant report

Variant	rs1382577
Chromosome Location	chr10:23282736-23282737
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1054052	0.87[CHB][hapmap];0.91[JPT][hapmap]
rs1060761	0.96[CEU][hapmap];0.86[CHB][hapmap];0.91[JPT][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10764370	0.80[CHB][hapmap]
rs10764371	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs10828394	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11013228	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11013244	0.89[CEU][hapmap];0.87[CHB][hapmap];0.95[JPT][hapmap]
rs1170929	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11814322	0.89[CEU][hapmap];0.87[CHB][hapmap];0.91[JPT][hapmap]
rs11814683	0.85[CEU][hapmap];0.86[CHB][hapmap];0.90[JPT][hapmap]
rs11817610	0.92[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap]
rs11819616	0.93[CEU][hapmap];0.92[CHB][hapmap];0.91[JPT][hapmap]
rs12780334	0.81[CEU][hapmap]
rs2927925	0.87[JPT][hapmap]
rs3101795	0.96[CEU][hapmap];0.86[JPT][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4748833	0.93[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23282600-23282800	Enhancers	Pancreas	Pancrea
2	chr10:23282600-23283000	Enhancers	HUES48 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links