Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44827763..44830392-chr10:44830833..44832482,2	MCF-7	breast:
2	chr10:44811932..44813553-chr10:44827635..44830396,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10508884	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10900020	1.00[YRI][hapmap]
rs10900022	1.00[YRI][hapmap]
rs10900025	0.90[JPT][hapmap]
rs11238987	0.89[YRI][hapmap]
rs11238991	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11815919	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12264745	0.91[JPT][hapmap]
rs12569869	0.91[ASN][1000 genomes]
rs12573553	0.98[ASN][1000 genomes]
rs1413520	0.90[JPT][hapmap]
rs17156139	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1836981	0.91[JPT][hapmap]
rs192365	0.91[JPT][hapmap]
rs2028100	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2028101	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs266078	0.90[JPT][hapmap]
rs266079	1.00[JPT][hapmap]
rs34050695	1.00[ASN][1000 genomes]
rs34066403	0.95[ASN][1000 genomes]
rs34386578	0.91[ASN][1000 genomes]
rs35698464	0.80[ASN][1000 genomes]
rs36095821	1.00[ASN][1000 genomes]
rs4366439	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56376391	0.91[ASN][1000 genomes]
rs58666734	0.80[ASN][1000 genomes]
rs77839	0.90[JPT][hapmap]
rs7918046	0.90[JPT][hapmap]
rs9663658	0.91[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038511	chr10:44596885-44870030	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv1052337	chr10:44821390-44865015	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44823200-44830200	Weak transcription	Pancreas	Pancrea
2	chr10:44827800-44829800	Enhancers	Skeletal Muscle Female	skeletal muscle

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