Variant report

Variant	rs7910365
Chromosome Location	chr10:97226939-97226940
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97226590..97227155-chr10:97360952..97361496,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs45454292	1.00[EUR][1000 genomes]
rs45487391	1.00[EUR][1000 genomes]
rs45491002	1.00[EUR][1000 genomes]
rs45495404	1.00[EUR][1000 genomes]
rs45620737	1.00[EUR][1000 genomes]
rs58512406	1.00[EUR][1000 genomes]
rs58759119	1.00[EUR][1000 genomes]
rs59282006	1.00[EUR][1000 genomes]
rs60480656	1.00[EUR][1000 genomes]
rs61102040	1.00[EUR][1000 genomes]
rs7912439	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7923670	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045002	chr10:97214418-97250630	Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:78 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97213200-97234200	Weak transcription	Colonic Mucosa	Colon
2	chr10:97216000-97228200	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr10:97218000-97229600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr10:97219800-97229600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:97220600-97232000	Enhancers	Fetal Heart	heart
6	chr10:97223200-97227000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr10:97223200-97228000	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr10:97223200-97229600	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr10:97223200-97230200	Enhancers	Fetal Brain Male	brain
10	chr10:97223200-97234000	Weak transcription	Ovary	ovary
11	chr10:97223600-97227000	Weak transcription	Gastric	stomach
12	chr10:97223600-97229200	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr10:97223800-97227000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr10:97223800-97227000	Weak transcription	HSMMtube	muscle
15	chr10:97224000-97229600	Weak transcription	Lung	lung
16	chr10:97224200-97227000	Weak transcription	Fetal Muscle Trunk	muscle
17	chr10:97224400-97227000	Weak transcription	Right Atrium	heart
18	chr10:97224600-97227000	Weak transcription	Stomach Mucosa	stomach
19	chr10:97224600-97229400	Weak transcription	Aorta	Aorta
20	chr10:97224800-97227000	Weak transcription	Fetal Muscle Leg	muscle
21	chr10:97224800-97227000	Weak transcription	Left Ventricle	heart
22	chr10:97224800-97227000	Weak transcription	Pancreas	Pancrea
23	chr10:97224800-97227000	Weak transcription	Psoas Muscle	Psoas
24	chr10:97224800-97229400	Weak transcription	Brain Hippocampus Middle	brain
25	chr10:97224800-97229600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr10:97224800-97237000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr10:97225000-97227000	Weak transcription	Right Ventricle	heart
28	chr10:97225000-97227800	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr10:97225000-97228000	Weak transcription	Brain Inferior Temporal Lobe	brain
30	chr10:97225000-97228200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
31	chr10:97225000-97228400	Weak transcription	Rectal Mucosa Donor 31	rectum
32	chr10:97225000-97228600	Weak transcription	Brain Substantia Nigra	brain
33	chr10:97225000-97229200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr10:97225000-97229600	Weak transcription	Brain Angular Gyrus	brain
35	chr10:97225800-97227000	Weak transcription	Stomach Smooth Muscle	stomach
36	chr10:97226200-97227400	Enhancers	Primary hematopoietic stem cells	blood
37	chr10:97226200-97227400	Enhancers	Primary hematopoietic stem cells short term culture	blood
38	chr10:97226200-97227400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr10:97226200-97227400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr10:97226200-97227400	Enhancers	Fetal Lung	lung
41	chr10:97226200-97227600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
42	chr10:97226200-97227600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr10:97226200-97227600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr10:97226200-97227600	Enhancers	HUES48 Cell Line	embryonic stem cell
45	chr10:97226200-97227600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr10:97226200-97227800	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr10:97226200-97228800	Enhancers	Brain Cingulate Gyrus	brain
48	chr10:97226200-97230200	Enhancers	Breast Myoepithelial Primary Cells	Breast
49	chr10:97226200-97236000	Enhancers	HepG2	liver
50	chr10:97226400-97227000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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