Variant report

Variant	rs7916640
Chromosome Location	chr10:25983719-25983720
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:25892005..25894948-chr10:25981825..25984468,2	MCF-7	breast:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10764579	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10828844	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10828845	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10828846	0.87[ASN][1000 genomes]
rs10828847	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10828848	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10828849	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11014619	0.82[JPT][hapmap]
rs11014679	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12242832	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16926129	0.82[JPT][hapmap]
rs16926240	0.92[ASN][1000 genomes]
rs16926262	0.97[ASN][1000 genomes]
rs16926264	0.97[ASN][1000 genomes]
rs17737307	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2290167	0.95[CEU][hapmap];0.83[CHB][hapmap];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2367978	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2367979	0.95[ASN][1000 genomes]
rs4747531	0.82[JPT][hapmap]
rs4749059	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4749063	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55752620	0.92[ASN][1000 genomes]
rs61613087	0.92[ASN][1000 genomes]
rs61846904	0.92[ASN][1000 genomes]
rs61846907	0.92[ASN][1000 genomes]
rs61846908	0.97[ASN][1000 genomes]
rs62000980	0.95[ASN][1000 genomes]
rs6482509	0.92[ASN][1000 genomes]
rs7076933	0.92[ASN][1000 genomes]
rs7080019	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7093919	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7098875	0.92[ASN][1000 genomes]
rs7099373	0.87[ASN][1000 genomes]
rs72796368	0.90[ASN][1000 genomes]
rs72796380	0.90[ASN][1000 genomes]
rs73610338	0.97[ASN][1000 genomes]
rs7902742	0.83[EUR][1000 genomes]
rs7908814	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9664692	0.97[ASN][1000 genomes]
rs989622	0.81[AFR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25962800-25993600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:25978400-25985600	Enhancers	Primary B cells from peripheral blood	blood
3	chr10:25980200-25985600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr10:25980800-25985200	Enhancers	Primary B cells from cord blood	blood
5	chr10:25980800-25990000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr10:25983200-25983800	Enhancers	Placenta	Placenta
7	chr10:25983200-25984400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr10:25983400-25984400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr10:25983600-25984000	Enhancers	Primary hematopoietic stem cells	blood
10	chr10:25983600-25984200	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr10:25983600-25984600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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