Variant report

(count:5 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NFIC	chr11:101979337-101979956	ECC-1	luminal epithelium:	n/a	n/a
2	POLR2A	chr11:101979349-101979992	H1-hESC	embryonic stem cell:	n/a	n/a
3	USF2	chr11:101979274-101979406	Hela-S3	cervix:	n/a	n/a
4	POLR2A	chr11:101979360-101984195	MCF10A-Er-Src	breast:	n/a	n/a
5	POLR2A	chr11:101979285-101979497	MCF10A-Er-Src	breast:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:101923063..101925584-chr11:101978678..101981062,2	MCF-7	breast:
2	chr11:66823134..66824640-chr11:101978587..101981113,2	MCF-7	breast:
3	chr11:101973697..101975768-chr11:101978687..101980575,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-YAP1-1	chr11:101978617-101980573	ENSG00000260008.1

No data

Variant related genes	Relation type
YAP1	TF binding region
ENSG00000173156	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10160773	0.80[ASN][1000 genomes]
rs10750631	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10791562	0.82[ASN][1000 genomes]
rs10791563	0.95[EUR][1000 genomes]
rs10895255	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10895256	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11225132	0.93[EUR][1000 genomes]
rs1365331	0.91[EUR][1000 genomes]
rs1426395	0.86[EUR][1000 genomes]
rs1426398	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1549496	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1820453	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2033083	0.91[EUR][1000 genomes]
rs3752685	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3824930	0.92[EUR][1000 genomes]
rs61918360	0.86[EUR][1000 genomes]
rs61918361	0.87[EUR][1000 genomes]
rs7105334	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7106388	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7123006	0.82[ASN][1000 genomes]
rs9787758	0.88[EUR][1000 genomes]
rs983112	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3362945	chr11:101736547-102114246	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv898333	chr11:101832670-102079986	Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101968000-101980400	Weak transcription	Right Atrium	heart
2	chr11:101976400-101979800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr11:101978200-101979400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr11:101978600-101980200	Enhancers	HepG2	liver
5	chr11:101979200-101979400	Enhancers	Esophagus	oesophagus
6	chr11:101979200-101980000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr11:101979200-101980000	Enhancers	Hela-S3	cervix
8	chr11:101979200-101980200	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr11:101979200-101980200	Enhancers	NHDF-Ad	bronchial

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