Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10466638	1.00[JPT][hapmap]
rs10750627	0.93[JPT][hapmap]
rs10750631	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10791553	0.82[JPT][hapmap]
rs10791554	1.00[JPT][hapmap]
rs10791562	0.81[CHB][hapmap];0.93[JPT][hapmap]
rs10895245	0.93[JPT][hapmap]
rs10895255	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10895256	0.92[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes]
rs11225115	0.87[JPT][hapmap]
rs11225132	0.88[EUR][1000 genomes]
rs1365331	0.87[EUR][1000 genomes]
rs1426395	0.83[EUR][1000 genomes]
rs1426398	0.89[CEU][hapmap];0.84[EUR][1000 genomes]
rs1549496	0.88[EUR][1000 genomes]
rs1820453	0.89[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes]
rs2033082	0.88[CEU][hapmap]
rs2033083	0.88[CEU][hapmap];0.88[EUR][1000 genomes]
rs3752685	0.92[EUR][1000 genomes]
rs3824930	0.88[EUR][1000 genomes]
rs61918360	0.83[EUR][1000 genomes]
rs61918361	0.84[EUR][1000 genomes]
rs6590945	0.93[JPT][hapmap]
rs6590946	0.93[JPT][hapmap]
rs7105334	0.96[EUR][1000 genomes]
rs7106388	0.88[CEU][hapmap];0.94[CHB][hapmap];0.93[JPT][hapmap];0.91[EUR][1000 genomes]
rs7123006	0.82[CHB][hapmap];0.93[JPT][hapmap]
rs7928958	0.82[JPT][hapmap]
rs7931899	0.95[EUR][1000 genomes]
rs9787758	0.81[CEU][hapmap];0.85[EUR][1000 genomes]
rs983112	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3362945	chr11:101736547-102114246	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv898333	chr11:101832670-102079986	Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101968000-101980400	Weak transcription	Right Atrium	heart
2	chr11:101976400-101979800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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