Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:34819205..34826551-chr11:34829823..34835499,8	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10836314	0.90[AFR][1000 genomes]
rs2116086	0.91[AFR][1000 genomes]
rs2915186	0.80[EUR][1000 genomes]
rs483976	0.83[ASN][1000 genomes]
rs496558	0.95[ASN][1000 genomes]
rs498798	0.81[AMR][1000 genomes]
rs499183	0.84[ASN][1000 genomes]
rs508062	0.82[EUR][1000 genomes]
rs512013	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs516228	0.84[ASN][1000 genomes]
rs523246	0.82[EUR][1000 genomes]
rs525202	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs535719	0.84[ASN][1000 genomes]
rs537364	0.84[ASN][1000 genomes]
rs537873	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs539044	0.84[ASN][1000 genomes]
rs546131	0.85[ASN][1000 genomes]
rs546521	0.95[ASN][1000 genomes]
rs552627	0.95[ASN][1000 genomes]
rs552868	0.91[ASN][1000 genomes]
rs553789	0.92[ASN][1000 genomes]
rs558967	0.92[ASN][1000 genomes]
rs568529	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs572690	0.91[ASN][1000 genomes]
rs578002	0.84[ASN][1000 genomes]
rs7130756	0.86[AFR][1000 genomes]
rs7932115	0.90[AFR][1000 genomes]
rs7946980	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832117	chr11:34639008-34831199	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv832118	chr11:34743123-34903951	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv897214	chr11:34764251-34821948	Weak transcription Bivalent Enhancer Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
4	nsv1049551	chr11:34811180-34833640	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv832119	chr11:34815528-35009370	Strong transcription Enhancers Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34814200-34820400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:34815000-34821200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr11:34815000-34833600	Weak transcription	HepG2	liver
4	chr11:34819400-34820600	Weak transcription	Stomach Mucosa	stomach
5	chr11:34819600-34821800	Enhancers	Liver	Liver
6	chr11:34819800-34827000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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