The 2.0 version of rSNPBase

Variant report

Variant rs8002765
Chromosome Location chr13:48822760-48822761
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48808400-48829000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr13:48808400-48829200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr13:48808400-48843600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr13:48809600-48837400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr13:48809800-48829200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr13:48810400-48830200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr13:48810800-48841000 Weak transcription Hela-S3 cervix
8 chr13:48811200-48843800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr13:48811400-48828200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr13:48811600-48825800 Weak transcription Gastric stomach
11 chr13:48811600-48827600 Weak transcription Thymus Thymus
12 chr13:48811600-48829000 Weak transcription Colonic Mucosa Colon
13 chr13:48811600-48829600 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr13:48811600-48835600 Weak transcription Fetal Brain Male brain
15 chr13:48811600-48836800 Weak transcription H9 Cell Line embryonic stem cell
16 chr13:48811800-48825200 Weak transcription Fetal Brain Female brain
17 chr13:48811800-48826400 Weak transcription Psoas Muscle Psoas
18 chr13:48811800-48827600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr13:48811800-48828000 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr13:48811800-48828200 Weak transcription Aorta Aorta
21 chr13:48812000-48825000 Weak transcription Brain Substantia Nigra brain
22 chr13:48812200-48825000 Weak transcription Brain Angular Gyrus brain
23 chr13:48812200-48825200 Weak transcription Fetal Kidney kidney
24 chr13:48812200-48825200 Weak transcription HSMMtube muscle
25 chr13:48812200-48826200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr13:48812200-48828200 Weak transcription Rectal Smooth Muscle rectum
27 chr13:48812400-48823000 Weak transcription Fetal Lung lung
28 chr13:48812400-48826200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr13:48812400-48827600 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr13:48812400-48827600 Weak transcription HUVEC blood vessel
31 chr13:48812400-48827800 Weak transcription HMEC breast
32 chr13:48812400-48827800 Weak transcription NH-A brain
33 chr13:48812400-48828000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr13:48812400-48828200 Weak transcription Muscle Satellite Cultured Cells --
35 chr13:48812600-48827800 Weak transcription Osteobl bone
36 chr13:48813400-48829600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr13:48813600-48826400 Weak transcription Right Atrium heart
38 chr13:48813600-48828200 Weak transcription HSMM muscle
39 chr13:48813800-48825800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr13:48814000-48826000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr13:48814000-48828200 Weak transcription NHEK skin
42 chr13:48814200-48827600 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr13:48814200-48827800 Weak transcription Fetal Muscle Trunk muscle
44 chr13:48814200-48827800 Weak transcription A549 lung
45 chr13:48814200-48828000 Weak transcription Fetal Intestine Large intestine
46 chr13:48814200-48828200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr13:48814400-48823000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr13:48814400-48823200 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr13:48814600-48824200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr13:48814600-48826400 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015