The 2.0 version of rSNPBase

Variant report

Variant rs73485079
Chromosome Location chr13:48844365-48844366
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48825400-48844400 Strong transcription Primary neutrophils fromperipheralblood blood
2 chr13:48828600-48845800 Weak transcription Stomach Mucosa stomach
3 chr13:48832800-48845200 Weak transcription Fetal Intestine Small intestine
4 chr13:48833600-48844400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr13:48833800-48851600 Weak transcription Fetal Heart heart
6 chr13:48835800-48849400 Weak transcription NHLF lung
7 chr13:48837800-48848000 Weak transcription A549 lung
8 chr13:48837800-48848600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr13:48837800-48848600 Weak transcription Fetal Brain Female brain
10 chr13:48837800-48853000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr13:48837800-48856400 Weak transcription Colon Smooth Muscle Colon
12 chr13:48838000-48845200 Weak transcription Brain Germinal Matrix brain
13 chr13:48838000-48845600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr13:48838000-48845600 Weak transcription HMEC breast
15 chr13:48838000-48847000 Weak transcription H9 Cell Line embryonic stem cell
16 chr13:48838000-48847800 Weak transcription Muscle Satellite Cultured Cells --
17 chr13:48838000-48847800 Weak transcription Psoas Muscle Psoas
18 chr13:48838000-48849600 Weak transcription Right Ventricle heart
19 chr13:48838000-48850000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr13:48838000-48850000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr13:48838000-48852800 Weak transcription HUVEC blood vessel
22 chr13:48838200-48845400 Weak transcription Fetal Intestine Large intestine
23 chr13:48838200-48849600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr13:48838400-48845200 Weak transcription Osteobl bone
25 chr13:48838400-48846600 Weak transcription NHDF-Ad bronchial
26 chr13:48838400-48847000 Weak transcription Brain Substantia Nigra brain
27 chr13:48839200-48845200 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr13:48839200-48846200 Weak transcription Brain Hippocampus Middle brain
29 chr13:48839800-48844400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr13:48839800-48845000 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr13:48839800-48845600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr13:48839800-48845600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr13:48839800-48848600 Weak transcription Rectal Smooth Muscle rectum
34 chr13:48839800-48850200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr13:48840000-48844800 Weak transcription Primary T cells fromperipheralblood blood
36 chr13:48840000-48845200 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr13:48840000-48851600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr13:48840200-48846600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr13:48841600-48844400 Strong transcription Primary B cells from cord blood blood
40 chr13:48841600-48844600 Weak transcription Fetal Brain Male brain
41 chr13:48841800-48844800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr13:48841800-48846200 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr13:48841800-48852000 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr13:48841800-48853200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr13:48842400-48844400 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr13:48842600-48844400 Strong transcription Thymus Thymus
47 chr13:48842600-48844600 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr13:48842800-48844600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr13:48843000-48844400 Strong transcription Primary T cells from cord blood blood
50 chr13:48843000-48844400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015