Variant report

Variant rs34692420
Chromosome Location chr13:48815600-48815601
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48808400-48829000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr13:48808400-48829200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr13:48808400-48843600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr13:48809600-48837400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr13:48809800-48829200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr13:48810200-48816400 Weak transcription Stomach Mucosa stomach
7 chr13:48810400-48830200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr13:48810800-48841000 Weak transcription Hela-S3 cervix
9 chr13:48811200-48819200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
10 chr13:48811200-48843800 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr13:48811400-48828200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr13:48811600-48819800 Weak transcription Spleen Spleen
13 chr13:48811600-48825800 Weak transcription Gastric stomach
14 chr13:48811600-48827600 Weak transcription Thymus Thymus
15 chr13:48811600-48829000 Weak transcription Colonic Mucosa Colon
16 chr13:48811600-48829600 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr13:48811600-48835600 Weak transcription Fetal Brain Male brain
18 chr13:48811600-48836800 Weak transcription H9 Cell Line embryonic stem cell
19 chr13:48811800-48818200 Weak transcription Brain Cingulate Gyrus brain
20 chr13:48811800-48825200 Weak transcription Fetal Brain Female brain
21 chr13:48811800-48826400 Weak transcription Psoas Muscle Psoas
22 chr13:48811800-48827600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr13:48811800-48828000 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr13:48811800-48828200 Weak transcription Aorta Aorta
25 chr13:48812000-48815800 Enhancers Brain Hippocampus Middle brain
26 chr13:48812000-48825000 Weak transcription Brain Substantia Nigra brain
27 chr13:48812200-48816800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr13:48812200-48819200 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr13:48812200-48825000 Weak transcription Brain Angular Gyrus brain
30 chr13:48812200-48825200 Weak transcription Fetal Kidney kidney
31 chr13:48812200-48825200 Weak transcription HSMMtube muscle
32 chr13:48812200-48826200 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr13:48812200-48828200 Weak transcription Rectal Smooth Muscle rectum
34 chr13:48812400-48816600 Weak transcription Primary B cells from cord blood blood
35 chr13:48812400-48818600 Genic enhancers Primary T helper cells PMA-I stimulated --
36 chr13:48812400-48819800 Genic enhancers Primary T helper cells fromperipheralblood blood
37 chr13:48812400-48823000 Weak transcription Fetal Lung lung
38 chr13:48812400-48826200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr13:48812400-48827600 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr13:48812400-48827600 Weak transcription HUVEC blood vessel
41 chr13:48812400-48827800 Weak transcription HMEC breast
42 chr13:48812400-48827800 Weak transcription NH-A brain
43 chr13:48812400-48828000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr13:48812400-48828200 Weak transcription Muscle Satellite Cultured Cells --
45 chr13:48812600-48816400 Weak transcription Brain Anterior Caudate brain
46 chr13:48812600-48827800 Weak transcription Osteobl bone
47 chr13:48813000-48815600 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr13:48813000-48816000 Strong transcription HUES6 Cell Line embryonic stem cell
49 chr13:48813200-48815800 Genic enhancers Primary T cells fromperipheralblood blood
50 chr13:48813200-48818600 Strong transcription Fetal Thymus thymus

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