Variant report

Variant	rs8016614
Chromosome Location	chr14:97356919-97356920
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:97349904..97353834-chr14:97354372..97357371,3	K562	blood:
2	chr14:97352755..97357017-chr14:97358100..97363870,8	K562	blood:
3	chr14:97351238..97352821-chr14:97355871..97358736,2	K562	blood:
4	chr14:97355083..97357318-chr14:97362370..97365310,3	K562	blood:

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs10131201	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10131630	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10145383	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10146571	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10149107	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10873476	0.84[ASN][1000 genomes]
rs11160369	0.84[ASN][1000 genomes]
rs11160371	0.91[ASN][1000 genomes]
rs11160375	0.84[ASN][1000 genomes]
rs11628733	0.84[ASN][1000 genomes]
rs12433112	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12434466	0.88[ASN][1000 genomes]
rs12435963	0.92[ASN][1000 genomes]
rs12590723	0.92[ASN][1000 genomes]
rs12878184	0.93[ASN][1000 genomes]
rs12882853	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12894621	0.85[ASN][1000 genomes]
rs12897731	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1951311	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1951312	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1957137	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2145636	0.88[ASN][1000 genomes]
rs2180896	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2224442	0.84[ASN][1000 genomes]
rs2230532	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3825576	0.89[ASN][1000 genomes]
rs4270096	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4900347	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4900349	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4900350	0.82[ASN][1000 genomes]
rs4900351	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4905546	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4905547	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4905552	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4905553	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4905555	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4905557	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4905558	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4905560	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4905564	0.85[ASN][1000 genomes]
rs4905568	0.87[ASN][1000 genomes]
rs58514314	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61981027	0.97[ASN][1000 genomes]
rs67804110	0.85[ASN][1000 genomes]
rs67957817	0.89[ASN][1000 genomes]
rs7141028	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs71419296	0.85[ASN][1000 genomes]
rs7156355	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs722869	0.84[ASN][1000 genomes]
rs723810	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs736929	0.97[ASN][1000 genomes]
rs8013081	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9285600	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9323951	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9323954	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9323955	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044202	chr14:97155291-97683983	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv542179	chr14:97155291-97683983	Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv948620	chr14:97334444-98133191	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:97294000-97362600	Weak transcription	Spleen	Spleen
2	chr14:97303400-97371600	Weak transcription	Ovary	ovary
3	chr14:97325600-97362000	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr14:97331000-97378400	Weak transcription	A549	lung
5	chr14:97341400-97357400	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr14:97342800-97367000	Weak transcription	NHEK	skin
7	chr14:97347000-97368200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr14:97348200-97361400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr14:97349200-97359200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr14:97349200-97367200	Weak transcription	Primary B cells from cord blood	blood
11	chr14:97349200-97367600	Weak transcription	Primary neutrophils fromperipheralblood	blood
12	chr14:97349200-97377400	Weak transcription	Primary T cells from cord blood	blood
13	chr14:97349400-97359000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr14:97349400-97369200	Weak transcription	Monocytes-CD14+_RO01746	blood
15	chr14:97354000-97360200	Weak transcription	Dnd41	blood
16	chr14:97355200-97363200	Weak transcription	K562	blood
17	chr14:97355400-97360400	Weak transcription	GM12878-XiMat	blood
18	chr14:97355400-97361000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr14:97356000-97361800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr14:97356000-97376600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr14:97356600-97357600	Enhancers	Fetal Thymus	thymus
22	chr14:97356600-97357600	Enhancers	Thymus	Thymus

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