Variant report

Variant	rs8019044
Chromosome Location	chr14:56553386-56553387
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:56552357..56554889-chr14:56680041..56682175,2	K562	blood:

Extended variants
information (count: 94 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:94)

rs_ID	r²[population]
rs10138745	0.87[ASN][1000 genomes]
rs10149912	0.91[ASN][1000 genomes]
rs10483663	0.85[EUR][1000 genomes]
rs10483664	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158072	0.85[EUR][1000 genomes]
rs11158073	0.91[ASN][1000 genomes]
rs11158074	0.98[ASN][1000 genomes]
rs11158075	0.98[ASN][1000 genomes]
rs1157501	0.98[ASN][1000 genomes]
rs11846023	0.93[ASN][1000 genomes]
rs1383395	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480647	0.98[ASN][1000 genomes]
rs1480648	0.98[ASN][1000 genomes]
rs1480649	0.98[ASN][1000 genomes]
rs1480651	0.98[ASN][1000 genomes]
rs1480653	0.98[ASN][1000 genomes]
rs1480654	0.98[ASN][1000 genomes]
rs1480655	0.98[ASN][1000 genomes]
rs1480656	0.98[ASN][1000 genomes]
rs17090922	0.92[CHB][hapmap];0.81[JPT][hapmap];0.83[ASN][1000 genomes]
rs17090962	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17090964	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17090970	0.87[ASN][1000 genomes]
rs17090982	0.98[ASN][1000 genomes]
rs17090986	0.98[ASN][1000 genomes]
rs17090998	0.98[ASN][1000 genomes]
rs17091004	0.98[ASN][1000 genomes]
rs17091006	0.98[ASN][1000 genomes]
rs17091008	0.98[ASN][1000 genomes]
rs17091010	0.98[ASN][1000 genomes]
rs17093198	0.82[EUR][1000 genomes]
rs1812362	0.80[ASN][1000 genomes]
rs1951954	0.98[ASN][1000 genomes]
rs1957889	0.98[ASN][1000 genomes]
rs28580335	0.98[ASN][1000 genomes]
rs3742572	0.90[ASN][1000 genomes]
rs4628882	0.98[ASN][1000 genomes]
rs55678499	0.91[ASN][1000 genomes]
rs55941817	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56196615	0.98[ASN][1000 genomes]
rs57016870	0.91[ASN][1000 genomes]
rs57186216	0.91[ASN][1000 genomes]
rs57701314	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58507155	0.98[ASN][1000 genomes]
rs59328971	0.95[ASN][1000 genomes]
rs59357371	0.93[ASN][1000 genomes]
rs59905171	0.91[ASN][1000 genomes]
rs61317680	0.94[ASN][1000 genomes]
rs61544265	0.98[ASN][1000 genomes]
rs6573080	0.87[EUR][1000 genomes]
rs7140378	0.97[ASN][1000 genomes]
rs7142629	0.98[ASN][1000 genomes]
rs7142937	0.98[ASN][1000 genomes]
rs7143395	0.87[EUR][1000 genomes]
rs7144227	0.98[ASN][1000 genomes]
rs7144527	0.98[ASN][1000 genomes]
rs7144901	0.98[ASN][1000 genomes]
rs7145187	0.98[ASN][1000 genomes]
rs7145439	0.98[ASN][1000 genomes]
rs7146538	0.98[ASN][1000 genomes]
rs7153447	0.82[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7153608	0.91[ASN][1000 genomes]
rs7154407	0.82[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7157348	0.87[EUR][1000 genomes]
rs7158199	0.98[ASN][1000 genomes]
rs7158316	0.98[ASN][1000 genomes]
rs7159040	0.98[ASN][1000 genomes]
rs7159290	0.98[ASN][1000 genomes]
rs7159691	0.98[ASN][1000 genomes]
rs7160120	0.96[ASN][1000 genomes]
rs7160744	0.98[ASN][1000 genomes]
rs73287035	0.85[EUR][1000 genomes]
rs73287042	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73287091	0.98[ASN][1000 genomes]
rs73287092	0.98[ASN][1000 genomes]
rs73287099	0.98[ASN][1000 genomes]
rs73288913	0.98[ASN][1000 genomes]
rs8004314	1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs8005783	0.89[ASN][1000 genomes]
rs8006589	0.91[ASN][1000 genomes]
rs8007410	0.87[EUR][1000 genomes]
rs8007444	0.98[ASN][1000 genomes]
rs8008108	0.91[ASN][1000 genomes]
rs8012389	0.98[ASN][1000 genomes]
rs8013624	0.87[EUR][1000 genomes]
rs8014396	0.85[EUR][1000 genomes]
rs8014415	0.98[ASN][1000 genomes]
rs8014498	0.98[ASN][1000 genomes]
rs8017757	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8018061	0.85[EUR][1000 genomes]
rs8018839	0.98[ASN][1000 genomes]
rs8019252	0.98[ASN][1000 genomes]
rs8019376	0.85[EUR][1000 genomes]
rs8022898	1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:56541000-56554200	Weak transcription	Gastric	stomach
2	chr14:56549400-56554200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr14:56549400-56554200	Weak transcription	Dnd41	blood
4	chr14:56549400-56554600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr14:56550800-56554000	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr14:56551200-56554400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr14:56552600-56554200	Weak transcription	Brain Germinal Matrix	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links