Variant report

Variant	rs8037074
Chromosome Location	chr15:74841660-74841661
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:74835177..74840998-chr15:74841566..74844825,6	K562	blood:
2	chr15:74837964..74840998-chr15:74841652..74845839,5	K562	blood:
3	chr15:74840503..74842245-chr15:74910348..74913581,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000179335	Chromatin interaction
ENSG00000179361	Chromatin interaction

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10459648	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11072492	0.83[AMR][1000 genomes]
rs12437519	0.82[ASN][1000 genomes]
rs12439113	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12442013	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12442097	0.82[ASN][1000 genomes]
rs12594447	0.81[AMR][1000 genomes]
rs1821848	0.83[AMR][1000 genomes]
rs2415241	0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2415242	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs4887159	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4887160	0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs6495115	0.83[AMR][1000 genomes]
rs7171838	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7177407	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7178568	0.82[ASN][1000 genomes]
rs8023479	0.82[ASN][1000 genomes]
rs8023865	0.82[ASN][1000 genomes]
rs8026181	0.83[AMR][1000 genomes]
rs8026923	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs8027066	0.81[AMR][1000 genomes]
rs8028163	0.83[AMR][1000 genomes]
rs8028430	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs8029116	0.83[AMR][1000 genomes]
rs8029215	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs8037714	0.83[AMR][1000 genomes]
rs8041030	0.83[AMR][1000 genomes]
rs8041807	0.83[AMR][1000 genomes]
rs8043082	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1809847	chr15:74734500-74948063	Genic enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74834600-74842800	Weak transcription	Esophagus	oesophagus
2	chr15:74836000-74842000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr15:74836200-74848000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
4	chr15:74836400-74846400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr15:74836600-74845800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
6	chr15:74837400-74842600	Enhancers	Fetal Lung	lung
7	chr15:74837400-74843200	Enhancers	Liver	Liver
8	chr15:74838600-74847600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr15:74839000-74842200	Weak transcription	Lung	lung
10	chr15:74839000-74845800	Strong transcription	H1 Cell Line	embryonic stem cell
11	chr15:74839000-74846200	Strong transcription	HUES48 Cell Line	embryonic stem cell
12	chr15:74839000-74846600	Weak transcription	Ovary	ovary
13	chr15:74839000-74855600	Weak transcription	Aorta	Aorta
14	chr15:74839000-74863400	Weak transcription	Gastric	stomach
15	chr15:74839000-74863600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr15:74839200-74842000	Strong transcription	Primary neutrophils fromperipheralblood	blood
17	chr15:74839200-74842000	Weak transcription	Fetal Intestine Large	intestine
18	chr15:74839200-74842000	Weak transcription	Rectal Mucosa Donor 31	rectum
19	chr15:74839200-74842000	Weak transcription	Stomach Smooth Muscle	stomach
20	chr15:74839200-74842000	Weak transcription	NHDF-Ad	bronchial
21	chr15:74839200-74842200	Enhancers	Fetal Brain Male	brain
22	chr15:74839200-74842600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr15:74839200-74843200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr15:74839200-74843600	Weak transcription	HSMMtube	muscle
25	chr15:74839200-74844800	Weak transcription	A549	lung
26	chr15:74839200-74845000	Strong transcription	Fetal Intestine Small	intestine
27	chr15:74839200-74845600	Weak transcription	Muscle Satellite Cultured Cells	--
28	chr15:74839200-74846600	Weak transcription	Rectal Smooth Muscle	rectum
29	chr15:74839200-74847400	Weak transcription	Osteobl	bone
30	chr15:74839200-74847800	Weak transcription	Psoas Muscle	Psoas
31	chr15:74839200-74850000	Strong transcription	HUES64 Cell Line	embryonic stem cell
32	chr15:74839200-74856400	Weak transcription	Fetal Kidney	kidney
33	chr15:74839200-74859200	Weak transcription	HepG2	liver
34	chr15:74839200-74860800	Weak transcription	Colonic Mucosa	Colon
35	chr15:74839200-74862000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr15:74839200-74865200	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr15:74839200-74866400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr15:74839200-74866800	Weak transcription	Pancreas	Pancrea
39	chr15:74839400-74843000	Genic enhancers	Primary T cells fromperipheralblood	blood
40	chr15:74839400-74865800	Weak transcription	HUVEC	blood vessel
41	chr15:74839400-74880600	Weak transcription	Hela-S3	cervix
42	chr15:74839600-74862400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
43	chr15:74839800-74842200	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr15:74839800-74845200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
45	chr15:74840000-74841800	Strong transcription	Monocytes-CD14+_RO01746	blood
46	chr15:74840000-74842400	Genic enhancers	Primary T helper cells fromperipheralblood	blood
47	chr15:74840000-74844000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr15:74840000-74845600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr15:74840000-74845800	Strong transcription	Primary B cells from cord blood	blood
50	chr15:74840000-74846000	Strong transcription	Primary B cells from peripheral blood	blood

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