Variant report

Variant rs805388
Chromosome Location chr2:54100160-54100161
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54084000-54102000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr2:54085400-54106600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr2:54086600-54101200 Weak transcription Fetal Brain Male brain
4 chr2:54087000-54168000 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr2:54087200-54176000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr2:54087400-54112200 Weak transcription Psoas Muscle Psoas
7 chr2:54087400-54112600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:54087400-54117400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:54087400-54137600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:54087600-54100800 Weak transcription Brain Angular Gyrus brain
11 chr2:54087600-54110800 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr2:54087600-54113600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:54087600-54116600 Weak transcription Pancreas Pancrea
14 chr2:54087600-54117000 Weak transcription Placenta Amnion Placenta Amnion
15 chr2:54087600-54187600 Weak transcription Stomach Mucosa stomach
16 chr2:54087800-54112200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr2:54088000-54113800 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr2:54088200-54100800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr2:54088400-54137200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr2:54088600-54138000 Strong transcription Primary B cells from peripheral blood blood
21 chr2:54089200-54104400 Strong transcription Osteobl bone
22 chr2:54089800-54106200 Strong transcription Left Ventricle heart
23 chr2:54089800-54136000 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr2:54090200-54103600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:54090200-54107400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr2:54090200-54137800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr2:54090200-54138200 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr2:54090400-54103800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr2:54090400-54137600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr2:54090800-54137400 Strong transcription Primary T cells fromperipheralblood blood
31 chr2:54091000-54137000 Strong transcription Fetal Thymus thymus
32 chr2:54091000-54137800 Strong transcription iPS-20b Cell Line embryonic stem cell
33 chr2:54091000-54138000 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr2:54091200-54138000 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr2:54091400-54137600 Strong transcription Liver Liver
36 chr2:54091800-54104400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:54092000-54103000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr2:54092200-54102200 Weak transcription Fetal Brain Female brain
39 chr2:54093200-54100800 Weak transcription Right Ventricle heart
40 chr2:54093200-54101200 Weak transcription Brain Germinal Matrix brain
41 chr2:54093400-54101000 Weak transcription Fetal Heart heart
42 chr2:54093800-54124000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr2:54094000-54100600 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr2:54094000-54100800 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr2:54094000-54110600 Weak transcription Colon Smooth Muscle Colon
46 chr2:54094000-54137800 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr2:54094200-54100600 Weak transcription Brain Inferior Temporal Lobe brain
48 chr2:54094200-54100800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr2:54094200-54101800 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr2:54094600-54100800 Weak transcription Rectal Smooth Muscle rectum

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