The 2.0 version of rSNPBase

Variant report

Variant rs8089860
Chromosome Location chr18:43556156-43556157
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43548000-43567000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr18:43548200-43556800 Weak transcription NHLF lung
3 chr18:43548200-43562800 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr18:43554200-43567200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr18:43554400-43558200 Enhancers Primary neutrophils fromperipheralblood blood
6 chr18:43554400-43566200 Weak transcription Liver Liver
7 chr18:43554600-43556400 Weak transcription Muscle Satellite Cultured Cells --
8 chr18:43554600-43556600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr18:43554600-43556800 Weak transcription Osteobl bone
10 chr18:43554600-43557000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr18:43554600-43557200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr18:43554600-43557200 Weak transcription HUVEC blood vessel
13 chr18:43554600-43557400 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr18:43554600-43558800 Weak transcription Primary B cells from cord blood blood
15 chr18:43554600-43560000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr18:43554600-43560000 Weak transcription Duodenum Mucosa Duodenum
17 chr18:43554600-43560000 Weak transcription Fetal Heart heart
18 chr18:43554600-43560000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr18:43554600-43560000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr18:43554600-43562600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr18:43554600-43563000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr18:43554600-43566200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr18:43554600-43566800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr18:43554600-43567400 Weak transcription Adipose Nuclei Adipose
25 chr18:43554600-43567800 Weak transcription Primary T cells from cord blood blood
26 chr18:43554600-43567800 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr18:43554600-43568000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr18:43554600-43568800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr18:43554600-43571400 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr18:43554800-43558200 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr18:43555000-43562600 Weak transcription Primary monocytes fromperipheralblood blood
32 chr18:43555800-43556200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr18:43555800-43557400 Enhancers K562 blood

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Last update: Aug 31, 2015