The 2.0 version of rSNPBase

Variant report

Variant rs817556
Chromosome Location chr17:67422367-67422368
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:67411400-67425000 Weak transcription Pancreas Pancrea
2 chr17:67411400-67425200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr17:67414000-67424200 Weak transcription Fetal Muscle Leg muscle
4 chr17:67414000-67429600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr17:67414000-67429800 Weak transcription Brain Hippocampus Middle brain
6 chr17:67414400-67424000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr17:67414400-67427800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr17:67414400-67429400 Weak transcription Fetal Stomach stomach
9 chr17:67414400-67430400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr17:67414400-67430600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr17:67414600-67422400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr17:67417200-67424000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr17:67417600-67430000 Weak transcription Brain Substantia Nigra brain
14 chr17:67419200-67426600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr17:67419400-67423000 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr17:67419600-67423200 Enhancers HUES48 Cell Line embryonic stem cell
17 chr17:67419800-67422800 Enhancers HUES6 Cell Line embryonic stem cell
18 chr17:67419800-67430000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr17:67419800-67436600 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr17:67420000-67423600 Weak transcription Primary monocytes fromperipheralblood blood
21 chr17:67420000-67423600 Weak transcription GM12878-XiMat blood
22 chr17:67420000-67423600 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr17:67420000-67424200 Weak transcription Primary T cells from cord blood blood
24 chr17:67420000-67447600 Weak transcription Fetal Thymus thymus
25 chr17:67420000-67498200 Weak transcription Thymus Thymus
26 chr17:67420200-67422800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr17:67420200-67424200 Weak transcription Primary T cells fromperipheralblood blood
28 chr17:67420200-67426800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr17:67420400-67423800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr17:67420400-67423800 Weak transcription Small Intestine intestine
31 chr17:67420400-67424000 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr17:67420400-67424400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr17:67420400-67424600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr17:67420400-67429600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr17:67420600-67426600 Weak transcription Primary hematopoietic stem cells blood
36 chr17:67420600-67427000 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr17:67420800-67422800 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr17:67420800-67430400 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr17:67421000-67422600 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr17:67421000-67424000 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr17:67421000-67424400 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr17:67421000-67425400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr17:67421000-67426600 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr17:67421200-67423000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr17:67421200-67426600 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr17:67421400-67423800 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr17:67421400-67423800 Weak transcription HUVEC blood vessel
48 chr17:67421400-67426200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr17:67421800-67422600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr17:67421800-67422600 Enhancers H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015