The 2.0 version of rSNPBase

Variant report

Variant rs9332486
Chromosome Location chr1:169555230-169555231
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169553800-169555400 Active TSS Primary T cells fromperipheralblood blood
2 chr1:169553800-169555800 Active TSS Liver Liver
3 chr1:169554000-169555600 Bivalent/Poised TSS Primary B cells from cord blood blood
4 chr1:169554200-169555400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr1:169554400-169555400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:169554400-169555400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:169554400-169555400 Active TSS Primary T cells from cord blood blood
8 chr1:169554400-169555400 Active TSS Primary T helper 17 cells PMA-I stimulated --
9 chr1:169554400-169555400 Active TSS Primary mononuclear cells fromperipheralblood Blood
10 chr1:169554400-169555400 Bivalent Enhancer Adipose Nuclei Adipose
11 chr1:169554400-169555400 Weak transcription Pancreas Pancrea
12 chr1:169554400-169555400 Weak transcription Right Atrium heart
13 chr1:169554400-169555400 Weak transcription HMEC breast
14 chr1:169554400-169555400 Weak transcription NHEK skin
15 chr1:169554400-169555600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:169554400-169555800 Active TSS Primary T regulatory cells fromperipheralblood blood
17 chr1:169554600-169555800 Active TSS Primary hematopoietic stem cells blood
18 chr1:169554800-169555400 Bivalent/Poised TSS Primary T helper memory cells from peripheral blood 1 blood
19 chr1:169554800-169555400 Active TSS Placenta Placenta
20 chr1:169554800-169556000 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
21 chr1:169554800-169556200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
22 chr1:169554800-169556200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
23 chr1:169554800-169556400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
24 chr1:169555000-169555400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
25 chr1:169555000-169555400 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:169555000-169556000 Flanking Active TSS Primary monocytes fromperipheralblood blood
27 chr1:169555000-169556000 Active TSS Pancreatic Islets Pancreatic Islet
28 chr1:169555000-169556000 Bivalent/Poised TSS HepG2 liver
29 chr1:169555000-169556200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
30 chr1:169555200-169555400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
31 chr1:169555200-169555400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:169555200-169555400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:169555200-169555400 Enhancers Brain Hippocampus Middle brain
34 chr1:169555200-169555400 Active TSS Rectal Mucosa Donor 29 rectum
35 chr1:169555200-169555400 Active TSS Right Ventricle heart
36 chr1:169555200-169556200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
37 chr1:169555200-169556200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015