The 2.0 version of rSNPBase

Variant report

Variant rs9342825
Chromosome Location chr6:71962755-71962756
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:71955600-71972600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:71957800-71965000 Enhancers Primary monocytes fromperipheralblood blood
3 chr6:71958000-71965000 Enhancers Primary hematopoietic stem cells short term culture blood
4 chr6:71958200-71963000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr6:71958400-71963400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr6:71958600-71963400 Enhancers Primary hematopoietic stem cells blood
7 chr6:71959000-71964000 Weak transcription Fetal Kidney kidney
8 chr6:71959400-71964000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr6:71959400-71964200 Weak transcription Fetal Muscle Leg muscle
10 chr6:71959400-71964400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr6:71959800-71967800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr6:71960200-71962800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr6:71960200-71963600 Weak transcription Right Atrium heart
14 chr6:71960200-71964400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr6:71960200-71964600 Enhancers Primary B cells from cord blood blood
16 chr6:71960400-71963800 Weak transcription HSMMtube muscle
17 chr6:71960600-71963000 Enhancers HUVEC blood vessel
18 chr6:71961000-71963400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr6:71961000-71963400 Weak transcription HSMM muscle
20 chr6:71961000-71964000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr6:71961000-71964400 Enhancers Primary B cells from peripheral blood blood
22 chr6:71961200-71963600 Weak transcription NHDF-Ad bronchial
23 chr6:71961200-71964200 Weak transcription NHLF lung
24 chr6:71961200-71965200 Enhancers Primary neutrophils fromperipheralblood blood
25 chr6:71961400-71963400 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr6:71961400-71963600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr6:71961400-71963600 Weak transcription Placenta Placenta
28 chr6:71961400-71963600 Weak transcription Left Ventricle heart
29 chr6:71961400-71963600 Weak transcription Right Ventricle heart
30 chr6:71961400-71964000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr6:71962000-71963800 Enhancers HUES64 Cell Line embryonic stem cell
32 chr6:71962000-71964400 Enhancers HUES48 Cell Line embryonic stem cell
33 chr6:71962200-71963000 Enhancers iPS-15b Cell Line embryonic stem cell
34 chr6:71962200-71963600 Weak transcription Brain Hippocampus Middle brain
35 chr6:71962400-71962800 Enhancers iPS-20b Cell Line embryonic stem cell
36 chr6:71962400-71964000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr6:71962400-71964400 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr6:71962600-71962800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr6:71962600-71962800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr6:71962600-71962800 Enhancers Muscle Satellite Cultured Cells --
41 chr6:71962600-71963000 Enhancers HUES6 Cell Line embryonic stem cell
42 chr6:71962600-71963000 Enhancers Adipose Nuclei Adipose
43 chr6:71962600-71965200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015