Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10080462	0.86[ASN][1000 genomes]
rs10755549	0.86[ASN][1000 genomes]
rs10755550	0.91[ASN][1000 genomes]
rs12198257	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12527313	0.88[AFR][1000 genomes]
rs4513748	0.83[ASN][1000 genomes]
rs4583944	0.86[ASN][1000 genomes]
rs6917156	0.84[ASN][1000 genomes]
rs6917168	0.84[ASN][1000 genomes]
rs73503196	0.91[AFR][1000 genomes]
rs73503200	0.91[AFR][1000 genomes]
rs7758727	0.91[ASN][1000 genomes]
rs9294889	0.95[ASN][1000 genomes]
rs9294891	0.86[ASN][1000 genomes]
rs9342825	0.82[ASN][1000 genomes]
rs9446358	0.84[ASN][1000 genomes]
rs9446360	0.86[ASN][1000 genomes]
rs9455384	0.88[ASN][1000 genomes]
rs9455385	0.95[ASN][1000 genomes]
rs9455390	0.91[ASN][1000 genomes]
rs9455391	0.87[ASN][1000 genomes]
rs9455392	0.89[ASN][1000 genomes]
rs9455393	0.91[ASN][1000 genomes]
rs9455394	0.84[ASN][1000 genomes]
rs9455395	0.89[ASN][1000 genomes]
rs9455396	0.88[ASN][1000 genomes]
rs9455397	0.86[ASN][1000 genomes]
rs9455398	0.86[ASN][1000 genomes]
rs9455400	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5341	chr6:71925073-71956936	Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71947000-71955000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:71950200-71955000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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