Variant report

Variant	rs9462362
Chromosome Location	chr6:37740575-37740576
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10046397	1.00[EUR][1000 genomes]
rs10080245	1.00[EUR][1000 genomes]
rs12178911	1.00[EUR][1000 genomes]
rs2842518	1.00[TSI][hapmap]
rs56958593	1.00[EUR][1000 genomes]
rs58305294	1.00[EUR][1000 genomes]
rs58698408	1.00[EUR][1000 genomes]
rs6906120	1.00[EUR][1000 genomes]
rs6912045	1.00[EUR][1000 genomes]
rs6924117	1.00[EUR][1000 genomes]
rs6926669	1.00[EUR][1000 genomes]
rs73730818	1.00[EUR][1000 genomes]
rs73730823	1.00[EUR][1000 genomes]
rs73730827	1.00[EUR][1000 genomes]
rs73730832	1.00[EUR][1000 genomes]
rs7756841	1.00[EUR][1000 genomes]
rs7765448	1.00[EUR][1000 genomes]
rs7769848	1.00[EUR][1000 genomes]
rs9462367	1.00[EUR][1000 genomes]
rs9462370	1.00[EUR][1000 genomes]
rs9462371	1.00[EUR][1000 genomes]
rs9470707	1.00[TSI][hapmap]
rs9470711	1.00[EUR][1000 genomes]
rs9470715	1.00[EUR][1000 genomes]
rs9470716	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs9470719	1.00[EUR][1000 genomes]
rs9470722	1.00[EUR][1000 genomes]
rs9470729	1.00[EUR][1000 genomes]
rs9470731	1.00[EUR][1000 genomes]
rs9470733	1.00[EUR][1000 genomes]
rs9470736	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1028825	chr6:37495154-38278320	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv1024016	chr6:37567651-37981590	Weak transcription Enhancers Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37731600-37751000	Weak transcription	Psoas Muscle	Psoas
2	chr6:37735200-37742200	Weak transcription	Liver	Liver
3	chr6:37740000-37740800	Enhancers	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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