Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:145335244..145337081-chr6:145340387..145343297,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs6570670	0.90[AMR][1000 genomes]
rs7747501	0.95[ASN][1000 genomes]
rs7764377	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7775211	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9322019	0.90[AMR][1000 genomes]
rs9484936	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9484937	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9484940	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9484941	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9484942	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9484943	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9484944	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9484946	0.95[AMR][1000 genomes]
rs9497169	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9497170	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9497173	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9497174	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9497175	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9497178	0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs9497179	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9497180	0.95[AMR][1000 genomes]
rs9497181	0.90[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016747	chr6:144917411-145599874	Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv886742	chr6:145269757-145376903	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145333600-145344200	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr6:145334200-145344200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr6:145337200-145344200	Weak transcription	Left Ventricle	heart
4	chr6:145338000-145343800	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr6:145339600-145343400	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr6:145339800-145343400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr6:145340200-145343600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr6:145342000-145344400	Weak transcription	Psoas Muscle	Psoas
9	chr6:145342600-145343600	Weak transcription	HepG2	liver
10	chr6:145342800-145346200	Weak transcription	Liver	Liver

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