Variant report

Variant	rs9493258
Chromosome Location	chr6:132588726-132588727
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SPI1	chr6:132588610-132589339	GM12878	blood:	n/a	chr6:132589040-132589053 chr6:132589042-132589049 chr6:132589037-132589046 chr6:132589039-132589052 chr6:132589041-132589050

Variant related genes	Relation type
EEF1A1P36	TF binding region

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs11968915	1.00[EUR][1000 genomes]
rs1321264	1.00[EUR][1000 genomes]
rs1590188	1.00[EUR][1000 genomes]
rs1853050	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1950683	1.00[EUR][1000 genomes]
rs1950684	1.00[EUR][1000 genomes]
rs56406631	1.00[EUR][1000 genomes]
rs58980974	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60466189	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61422817	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6569783	1.00[EUR][1000 genomes]
rs6569784	1.00[EUR][1000 genomes]
rs6569787	1.00[EUR][1000 genomes]
rs6916284	1.00[EUR][1000 genomes]
rs6929031	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6934052	1.00[EUR][1000 genomes]
rs73541952	1.00[EUR][1000 genomes]
rs73553745	1.00[EUR][1000 genomes]
rs73553772	1.00[EUR][1000 genomes]
rs73553774	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553777	1.00[EUR][1000 genomes]
rs73553786	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553792	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553798	1.00[EUR][1000 genomes]
rs73553800	1.00[EUR][1000 genomes]
rs73555603	1.00[EUR][1000 genomes]
rs7739155	1.00[EUR][1000 genomes]
rs7739770	1.00[EUR][1000 genomes]
rs7739798	1.00[EUR][1000 genomes]
rs7772278	1.00[EUR][1000 genomes]
rs9483418	1.00[EUR][1000 genomes]
rs9483420	1.00[EUR][1000 genomes]
rs9483421	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9483426	1.00[EUR][1000 genomes]
rs9483427	1.00[EUR][1000 genomes]
rs9493248	1.00[EUR][1000 genomes]
rs9493250	1.00[EUR][1000 genomes]
rs9493251	1.00[EUR][1000 genomes]
rs9493253	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493256	1.00[EUR][1000 genomes]
rs9493261	1.00[EUR][1000 genomes]
rs9493262	1.00[EUR][1000 genomes]
rs9493263	1.00[EUR][1000 genomes]
rs9493264	1.00[EUR][1000 genomes]
rs9493266	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9493267	1.00[EUR][1000 genomes]
rs9493271	1.00[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132588400-132589000	Enhancers	Aorta	Aorta
2	chr6:132588400-132589400	Enhancers	GM12878-XiMat	blood
3	chr6:132588400-132590800	Enhancers	Primary B cells from peripheral blood	blood
4	chr6:132588400-132592800	Enhancers	Primary B cells from cord blood	blood

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