Variant report

Variant	rs9496594
Chromosome Location	chr6:143667617-143667618
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11751030	0.94[CEU][hapmap];0.86[CHB][hapmap];0.84[JPT][hapmap];0.89[EUR][1000 genomes]
rs11751506	0.84[EUR][1000 genomes]
rs11753058	0.81[CEU][hapmap]
rs11755477	0.82[CEU][hapmap]
rs11757293	0.94[CEU][hapmap];0.87[CHB][hapmap];0.82[JPT][hapmap];0.89[EUR][1000 genomes]
rs11758932	0.86[EUR][1000 genomes]
rs1364651	0.89[EUR][1000 genomes]
rs1559599	0.94[CEU][hapmap];0.87[CHB][hapmap];0.82[JPT][hapmap];0.89[EUR][1000 genomes]
rs2161972	0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2303386	0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2328478	0.88[EUR][1000 genomes]
rs28502112	0.88[EUR][1000 genomes]
rs35362528	0.89[EUR][1000 genomes]
rs4896635	0.82[CEU][hapmap]
rs4896636	0.82[CEU][hapmap]
rs4896640	0.83[CEU][hapmap]
rs4896650	0.91[EUR][1000 genomes]
rs6924104	0.91[EUR][1000 genomes]
rs6937858	0.82[CEU][hapmap]
rs73000182	0.88[EUR][1000 genomes]
rs9399439	0.94[CEU][hapmap];0.87[CHB][hapmap];0.82[JPT][hapmap];0.88[EUR][1000 genomes]
rs9403485	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9403486	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9496565	0.83[CEU][hapmap]
rs9908	0.93[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];0.85[MEX][hapmap];0.96[TSI][hapmap];0.80[YRI][hapmap];0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143642600-143675600	Weak transcription	Left Ventricle	heart
2	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
3	chr6:143654000-143672000	Weak transcription	Ovary	ovary
4	chr6:143654400-143667800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:143658400-143670200	Weak transcription	NHDF-Ad	bronchial
6	chr6:143658800-143669400	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr6:143659400-143668400	Weak transcription	Fetal Intestine Small	intestine
8	chr6:143661000-143669400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:143662800-143675600	Weak transcription	Liver	Liver
10	chr6:143663000-143670800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr6:143666200-143667800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr6:143667600-143669400	Weak transcription	Osteobl	bone

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