Variant report

Variant	rs9498151
Chromosome Location	chr6:149087988-149087989
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:149086530..149088907-chr6:149122938..149124830,2	MCF-7	breast:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs9485327	0.81[EUR][1000 genomes]
rs9485328	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9498148	0.81[EUR][1000 genomes]
rs9498149	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9498150	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9498152	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9498154	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9498155	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9498156	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9689803	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:149082400-149097400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:149082600-149091200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr6:149083000-149090000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:149083000-149090000	Weak transcription	Fetal Muscle Trunk	muscle
5	chr6:149083000-149090000	Weak transcription	Left Ventricle	heart
6	chr6:149083000-149093000	Weak transcription	Right Atrium	heart
7	chr6:149083000-149097400	Weak transcription	Brain Substantia Nigra	brain
8	chr6:149083200-149088200	Enhancers	Primary B cells from peripheral blood	blood
9	chr6:149083200-149090000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr6:149083200-149097400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr6:149083400-149088200	Enhancers	Primary B cells from cord blood	blood
12	chr6:149083400-149090000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr6:149083600-149090200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr6:149083600-149090800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
15	chr6:149083600-149091400	Weak transcription	HSMMtube	muscle
16	chr6:149083600-149091800	Weak transcription	Brain Anterior Caudate	brain
17	chr6:149083600-149093400	Weak transcription	Esophagus	oesophagus
18	chr6:149083600-149098000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr6:149083800-149089800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr6:149083800-149091400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
21	chr6:149083800-149091600	Weak transcription	Primary T cells from cord blood	blood
22	chr6:149084000-149097600	Weak transcription	Fetal Stomach	stomach
23	chr6:149084200-149091200	Weak transcription	Primary T helper cells PMA-I stimulated	--
24	chr6:149084200-149097000	Weak transcription	Colon Smooth Muscle	Colon
25	chr6:149084200-149097400	Weak transcription	Ovary	ovary
26	chr6:149084400-149089800	Weak transcription	Fetal Brain Male	brain
27	chr6:149084800-149090200	Weak transcription	Dnd41	blood
28	chr6:149084800-149092000	Enhancers	HUES64 Cell Line	embryonic stem cell
29	chr6:149085200-149091600	Enhancers	iPS-20b Cell Line	embryonic stem cell
30	chr6:149085200-149092600	Enhancers	HUES48 Cell Line	embryonic stem cell
31	chr6:149085400-149088200	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr6:149085400-149091200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
33	chr6:149085400-149091800	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr6:149086200-149088400	Enhancers	HUES6 Cell Line	embryonic stem cell
35	chr6:149086400-149088200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
36	chr6:149087000-149088000	Enhancers	ES-I3 Cell Line	embryonic stem cell
37	chr6:149087000-149088400	Enhancers	Fetal Thymus	thymus
38	chr6:149087200-149088200	Enhancers	H1 Cell Line	embryonic stem cell
39	chr6:149087200-149088400	Enhancers	H9 Cell Line	embryonic stem cell
40	chr6:149087400-149088000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
41	chr6:149087600-149111600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
42	chr6:149087800-149090000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
43	chr6:149087800-149090000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr6:149087800-149090000	Weak transcription	Fetal Muscle Leg	muscle
45	chr6:149087800-149090000	Weak transcription	Lung	lung
46	chr6:149087800-149090000	Weak transcription	Pancreas	Pancrea
47	chr6:149087800-149090000	Weak transcription	Stomach Mucosa	stomach
48	chr6:149087800-149090000	Weak transcription	Spleen	Spleen
49	chr6:149087800-149090200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
50	chr6:149087800-149091200	Weak transcription	Fetal Heart	heart

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