Variant report

Variant	rs9498156
Chromosome Location	chr6:149102353-149102354
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13195218	1.00[CEU][hapmap]
rs9485328	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9498149	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9498150	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9498151	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9498152	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9498154	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9498155	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9689803	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:149087600-149111600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr6:149087800-149106000	Weak transcription	Gastric	stomach
3	chr6:149093200-149102600	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr6:149094000-149102400	Weak transcription	Primary T cells fromperipheralblood	blood
5	chr6:149095400-149111600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr6:149097000-149114400	Weak transcription	Primary B cells from cord blood	blood
7	chr6:149098200-149104600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr6:149098200-149107000	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr6:149098400-149102400	Weak transcription	Aorta	Aorta
10	chr6:149098400-149103000	Weak transcription	Fetal Stomach	stomach
11	chr6:149098400-149104800	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr6:149098400-149114000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr6:149098400-149114600	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr6:149098400-149114600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr6:149098600-149103800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr6:149098600-149112800	Weak transcription	Stomach Mucosa	stomach
17	chr6:149099800-149102600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr6:149100200-149102400	Weak transcription	Ovary	ovary
19	chr6:149100200-149102600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
20	chr6:149100200-149111600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr6:149100400-149103600	Enhancers	Fetal Heart	heart
22	chr6:149101200-149109600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr6:149102000-149102400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
24	chr6:149102000-149102400	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr6:149102000-149103000	Flanking Active TSS	GM12878-XiMat	blood
26	chr6:149102200-149102400	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
27	chr6:149102200-149102600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
28	chr6:149102200-149102600	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
29	chr6:149102200-149102600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr6:149102200-149102800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
31	chr6:149102200-149103600	Enhancers	Primary B cells from peripheral blood	blood
32	chr6:149102200-149103600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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