Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:16119803..16122406-chr7:16123065..16126585,4	K562	blood:

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1034958	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10950599	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13225542	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1528135	0.83[EUR][1000 genomes]
rs1528137	0.85[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1528148	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1918859	0.87[AMR][1000 genomes]
rs2056419	0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs2056420	0.87[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs56064186	0.82[ASN][1000 genomes]
rs6461221	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6945873	0.87[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs6946639	0.83[EUR][1000 genomes]
rs7798339	0.85[AMR][1000 genomes]
rs875127	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016642	chr7:15884061-16799788	Genic enhancers Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv949309	chr7:15986709-16236162	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv949555	chr7:16078412-16279290	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:16117200-16126400	Weak transcription	Aorta	Aorta
2	chr7:16118200-16129400	Weak transcription	Fetal Muscle Leg	muscle
3	chr7:16121800-16126400	Weak transcription	Gastric	stomach
4	chr7:16122200-16133000	Weak transcription	Psoas Muscle	Psoas
5	chr7:16122400-16135400	Weak transcription	Left Ventricle	heart
6	chr7:16123000-16125200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr7:16123000-16125200	Enhancers	HMEC	breast
8	chr7:16123200-16124000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr7:16123400-16124000	Enhancers	A549	lung
10	chr7:16123400-16124200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr7:16123400-16124400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr7:16123400-16124400	Enhancers	Fetal Lung	lung
13	chr7:16123400-16124600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr7:16123400-16124600	Enhancers	Muscle Satellite Cultured Cells	--
15	chr7:16123400-16125000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr7:16123400-16125000	Enhancers	Brain Germinal Matrix	brain
17	chr7:16123400-16125000	Enhancers	NHEK	skin
18	chr7:16123600-16124400	Enhancers	Fetal Heart	heart
19	chr7:16123800-16124400	Flanking Active TSS	HUVEC	blood vessel
20	chr7:16123800-16124400	Enhancers	Osteobl	bone

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