Variant report

Variant	rs9737172
Chromosome Location	chr11:8582378-8582379
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:8581571..8583395-chr11:8585433..8587606,2	K562	blood:

Variant related genes	Relation type
ENSG00000130413	Chromatin interaction

Extended variants
information (count: 75 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:73)

rs_ID	r²[population]
rs10437594	0.89[ASN][1000 genomes]
rs10437663	0.89[ASN][1000 genomes]
rs10743077	0.93[ASN][1000 genomes]
rs10769909	0.93[ASN][1000 genomes]
rs10769912	0.93[ASN][1000 genomes]
rs10769913	0.93[ASN][1000 genomes]
rs10840046	0.83[ASN][1000 genomes]
rs10840048	0.83[ASN][1000 genomes]
rs10840049	0.93[ASN][1000 genomes]
rs10840053	0.86[ASN][1000 genomes]
rs10840054	0.93[ASN][1000 genomes]
rs10840059	0.93[ASN][1000 genomes]
rs10840068	0.93[ASN][1000 genomes]
rs10840069	0.93[ASN][1000 genomes]
rs10840071	0.93[ASN][1000 genomes]
rs10840073	0.93[ASN][1000 genomes]
rs10840074	1.00[ASN][1000 genomes]
rs10840075	0.83[ASN][1000 genomes]
rs10840076	0.83[ASN][1000 genomes]
rs10840078	0.83[ASN][1000 genomes]
rs10840082	0.83[ASN][1000 genomes]
rs10840086	0.93[ASN][1000 genomes]
rs10840088	0.93[ASN][1000 genomes]
rs11041922	0.83[ASN][1000 genomes]
rs11041923	0.83[ASN][1000 genomes]
rs11041928	0.86[ASN][1000 genomes]
rs11041936	0.93[ASN][1000 genomes]
rs11041937	0.93[ASN][1000 genomes]
rs11041938	0.93[ASN][1000 genomes]
rs11041942	0.93[ASN][1000 genomes]
rs11041956	0.93[ASN][1000 genomes]
rs11041957	0.93[ASN][1000 genomes]
rs11041959	0.93[ASN][1000 genomes]
rs11041961	0.93[ASN][1000 genomes]
rs11041984	1.00[ASN][1000 genomes]
rs11041987	1.00[ASN][1000 genomes]
rs11041988	1.00[ASN][1000 genomes]
rs11041989	1.00[ASN][1000 genomes]
rs11041992	1.00[ASN][1000 genomes]
rs11042001	0.83[ASN][1000 genomes]
rs11042005	0.83[ASN][1000 genomes]
rs11042009	0.80[ASN][1000 genomes]
rs11042010	0.89[ASN][1000 genomes]
rs11512437	0.93[ASN][1000 genomes]
rs11517716	0.93[ASN][1000 genomes]
rs12281197	0.83[ASN][1000 genomes]
rs12282087	0.93[ASN][1000 genomes]
rs12282398	0.93[ASN][1000 genomes]
rs12283443	0.93[ASN][1000 genomes]
rs12361165	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12364713	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12365973	0.93[ASN][1000 genomes]
rs12418359	0.93[ASN][1000 genomes]
rs12418525	0.93[ASN][1000 genomes]
rs12422205	0.93[ASN][1000 genomes]
rs12573963	0.93[ASN][1000 genomes]
rs12575045	0.93[ASN][1000 genomes]
rs1867812	0.93[ASN][1000 genomes]
rs2100066	0.93[ASN][1000 genomes]
rs34381273	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4450173	0.93[ASN][1000 genomes]
rs4627069	0.83[ASN][1000 genomes]
rs58364522	0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59084068	0.83[ASN][1000 genomes]
rs7102605	0.93[ASN][1000 genomes]
rs7108120	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7108379	0.93[ASN][1000 genomes]
rs7127840	0.93[ASN][1000 genomes]
rs726008	0.83[ASN][1000 genomes]
rs73403636	0.93[ASN][1000 genomes]
rs73408023	0.93[ASN][1000 genomes]
rs73408025	0.93[ASN][1000 genomes]
rs7941278	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751035	chr11:8431654-8685451	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv896983	chr11:8526643-8682465	ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8580400-8588600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:8581800-8582600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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