Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1124217	0.82[EUR][1000 genomes]
rs13065394	1.00[EUR][1000 genomes]
rs13083001	0.81[EUR][1000 genomes]
rs13092280	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1606508	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs16840202	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17362409	0.84[EUR][1000 genomes]
rs1901039	0.81[EUR][1000 genomes]
rs2370048	0.84[EUR][1000 genomes]
rs34221030	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35716595	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6776118	0.81[EUR][1000 genomes]
rs6789490	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6803959	0.81[EUR][1000 genomes]
rs7614857	0.81[EUR][1000 genomes]
rs7618220	0.81[EUR][1000 genomes]
rs7628842	0.81[EUR][1000 genomes]
rs7641938	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9289443	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9289444	0.92[EUR][1000 genomes]
rs9820056	0.84[EUR][1000 genomes]
rs9838325	0.84[EUR][1000 genomes]
rs9838338	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9855734	0.84[EUR][1000 genomes]
rs9867089	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9876399	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9877835	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4016	chr3:133015463-133032477	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	esv2757011	chr3:133020950-133032892	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv2759179	chr3:133020950-133032892	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv1014344	chr3:133024614-133042938	Enhancers ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133016400-133038200	Weak transcription	Fetal Lung	lung
2	chr3:133021000-133031800	Weak transcription	HSMM	muscle
3	chr3:133021000-133037600	Weak transcription	Cortex derived primary cultured neurospheres	brain

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