The 2.0 version of rSNPBase

Variant report

Variant rs9985227
Chromosome Location chr3:17211595-17211596
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17191400-17217600 Weak transcription Small Intestine intestine
2 chr3:17195000-17224200 Weak transcription Fetal Kidney kidney
3 chr3:17195200-17223000 Weak transcription Fetal Brain Female brain
4 chr3:17195800-17219000 Strong transcription Primary B cells from peripheral blood blood
5 chr3:17196600-17212200 Weak transcription Placenta Amnion Placenta Amnion
6 chr3:17198400-17225200 Weak transcription HMEC breast
7 chr3:17198600-17212600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr3:17200200-17216800 Weak transcription HSMMtube muscle
9 chr3:17200400-17216400 Weak transcription NHDF-Ad bronchial
10 chr3:17200400-17216600 Weak transcription NH-A brain
11 chr3:17200800-17225600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr3:17201000-17216400 Weak transcription Muscle Satellite Cultured Cells --
13 chr3:17201000-17220400 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr3:17201200-17236200 Weak transcription Fetal Brain Male brain
15 chr3:17202200-17213000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr3:17202400-17216400 Weak transcription HSMM muscle
17 chr3:17202400-17217200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr3:17202600-17212200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr3:17202800-17217400 Weak transcription HUVEC blood vessel
20 chr3:17203200-17212200 Weak transcription Brain Germinal Matrix brain
21 chr3:17203200-17216600 Weak transcription Colon Smooth Muscle Colon
22 chr3:17203200-17224400 Weak transcription A549 lung
23 chr3:17203800-17217200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr3:17203800-17244200 Weak transcription Colonic Mucosa Colon
25 chr3:17204200-17216600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr3:17204400-17216600 Weak transcription Right Atrium heart
27 chr3:17204400-17221200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr3:17206800-17216400 Weak transcription Fetal Heart heart
29 chr3:17208000-17223600 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr3:17208200-17212800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr3:17208200-17213200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr3:17208200-17216600 Weak transcription NHLF lung
33 chr3:17208200-17217200 Weak transcription Brain Inferior Temporal Lobe brain
34 chr3:17208200-17244000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr3:17208400-17211600 Weak transcription Brain Cingulate Gyrus brain
36 chr3:17208400-17212200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr3:17208400-17213800 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr3:17208400-17214400 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr3:17208400-17214400 Weak transcription Psoas Muscle Psoas
40 chr3:17208400-17215800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr3:17208400-17216600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr3:17208400-17216600 Weak transcription Osteobl bone
43 chr3:17208400-17217200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr3:17208400-17221000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr3:17208400-17221000 Weak transcription Brain Anterior Caudate brain
46 chr3:17208400-17223600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr3:17208400-17224400 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr3:17208400-17228600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr3:17208400-17243800 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr3:17208400-17244000 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015